Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  377 bits (968), Expect = e-109
 Identities = 190/335 (56%), Positives = 248/335 (74%), Gaps = 12/335 (3%)

Query: 4   KATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNGY 63
           K  ILVVDD   N+ +L  IL ++Y++  A  G  AL LV +  PDLILLD+MMP M G 
Sbjct: 5   KPLILVVDDEAANLRVLKQILQDEYQLSFAKSGQEALRLVGQKRPDLILLDIMMPDMTGL 64

Query: 64  EVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLAL 123
           ++CKLLK  P +  IPVIFVTAL++ ADEA GFA GAVDYITKPVS+ +V+ARV+THL+L
Sbjct: 65  DLCKLLKANPQSAGIPVIFVTALNDEADEATGFAAGAVDYITKPVSSAIVRARVRTHLSL 124

Query: 124 YDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLLAIKLGL 183
                        + +EL+ TR +II+RLGRAAE+KDNETG+HV+RMSHYA++LA   GL
Sbjct: 125 V------------QAEELKVTRLKIIQRLGRAAEFKDNETGMHVMRMSHYAKVLARAYGL 172

Query: 184 PSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIGEHGDPLL 243
             +  ++L +A+PMHDIGKIG  D +L KPGKL  EE+++M+ H  IGA+IIGE    L+
Sbjct: 173 GESHADMLLHAAPMHDIGKIGIADHILLKPGKLTEEEFEVMKTHPQIGADIIGEDDSLLM 232

Query: 244 QMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPWTIEATM 303
           QMAR +ALTHHEKWDG+GYP G++ E IP+EGRIVAIADVFDALTS RPYK+ W+IE T+
Sbjct: 233 QMARTVALTHHEKWDGSGYPRGIAGEAIPVEGRIVAIADVFDALTSDRPYKKAWSIEDTL 292

Query: 304 ELLENQAGQHFDPKLVEEFKQILPEVIAIRNTYFE 338
            L+  Q G+HF+P LVE  +Q L +++ I+ T+ +
Sbjct: 293 RLMREQKGRHFEPLLVELLEQNLDKILDIKQTFVD 327