Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 385 a.a., response regulator from Rhodopseudomonas palustris CGA009

 Score =  237 bits (605), Expect = 3e-67
 Identities = 132/334 (39%), Positives = 186/334 (55%), Gaps = 9/334 (2%)

Query: 8   LVVDDTPENIDILVGILGEDYKVKVAI--DGPRALALVTKTLPDLILLDVMMPGMNGYEV 65
           LVVDD+   +D L   +  D +V V    D   AL+       D++  D  MP M+G  +
Sbjct: 6   LVVDDSRSALDYLKRTIEADGQVHVIAFTDPLEALSSARNIDIDIVFADYEMPKMDGISL 65

Query: 66  CKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLAL-- 123
            + L+  P    IP++ +T++       Q    GA D++ K   +   + R++  + L  
Sbjct: 66  IRRLRSLPKFSDIPIVMITSIESDEVRLQALDAGATDFLPKRPKSLETQVRLRNMIRLGS 125

Query: 124 -----YDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLLA 178
                 D+  LL  +V   T  L+E   EII RL  + EY+DN+TG H +R++ Y+R++A
Sbjct: 126 AVRKLNDRAALLASEVARATHALQEREEEIILRLALSVEYRDNDTGDHTLRVAKYSRMIA 185

Query: 179 IKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIGEH 238
             LGLP   C  +Y A+P+HD+GK+ TPD +L KPGKL  +E  +MQ H  IGA I+   
Sbjct: 186 EGLGLPERLCRDIYLAAPLHDVGKVATPDHILLKPGKLTPDEIAVMQTHTTIGASILAGS 245

Query: 239 GDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPWT 298
              L+Q+A  IA+ HHE+WDG GYPN L    IPI  RIVA+ADVFDAL + RPYK    
Sbjct: 246 RCELIQLAADIAIGHHERWDGKGYPNKLKGAEIPIAARIVAVADVFDALATARPYKVAMP 305

Query: 299 IEATMELLENQAGQHFDPKLVEEFKQILPEVIAI 332
           +    + LEN  GQHFDP  V+ F     EV+AI
Sbjct: 306 LPVARQHLENGRGQHFDPTCVDVFLARWDEVVAI 339