Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  127 bits (319), Expect = 1e-33
 Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)

Query: 2   MDKATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVTKT-LPDLILLDVMMPGM 60
           + + T+LVVDDT EN+ ++  +L   Y V++A  G RAL +   T +PDLILLD+MMP M
Sbjct: 14  LHQETVLVVDDTKENLTVIGELLNPHYNVRIANSGQRALKVANSTPVPDLILLDIMMPEM 73

Query: 61  NGYEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTH 120
           +GYE    L+  P T HIPVIFVTAL    DE +G ALGAVDYI KP+   ++  R++T 
Sbjct: 74  DGYETLAELRANPATRHIPVIFVTALDADEDEERGLALGAVDYIAKPIRPAILLGRIRTQ 133

Query: 121 LALYDQKRLLEQQVKERTQELE-ETRFEIIRRLGRAAEYKDNETGLHVVR 169
           L L    +L + Q++ +   LE E +  +   L    + + NE  L+ +R
Sbjct: 134 LDL----KLAQDQLRRQNASLEAEVQRRVAENLAIQEQGQRNEARLNRMR 179



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 6   TILVVDDTPENIDILVGILG-EDYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNGYE 64
           T+L+VDD P  +  L  +   E Y +  A  G   L ++      +I+ D  MP M+G E
Sbjct: 746 TLLLVDDEPGILSALKRLFRREGYVILTANSGKEGLDILAGHDVGVIISDARMPEMDGAE 805

Query: 65  -VCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKP 107
            + K+    P T  I +   T L  V        L    ++TKP
Sbjct: 806 FLGKVRAMYPDTMRIILSGYTDLKAVTSAVNRGEL--FKFLTKP 847