Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 346 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  261 bits (667), Expect = 2e-74
 Identities = 146/339 (43%), Positives = 199/339 (58%), Gaps = 9/339 (2%)

Query: 7   ILVVDDTPENIDILVGILG--EDYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNGYE 64
           ++V+DD+  N+ +   +    E  +V   +    ALA   +   D++++D MMP  +G E
Sbjct: 5   LVVIDDSEINLTLFRVLAERIEGVRVHGFLSSSEALAWCEQGQADVVVVDYMMPAPDGLE 64

Query: 65  VCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLALY 124
                +Q P    +P+I VTA +      +    GA D++ KPV      ARV+   AL 
Sbjct: 65  FISHFRQLPGMAEVPLIMVTANNLRDVRCRALEQGASDFLNKPVDKDEFLARVRNMCALR 124

Query: 125 -------DQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLL 177
                  D+   L ++V + T  L E   E I  L +AAEY+D ETG H++RM+HY+ L+
Sbjct: 125 RSQRQLADRAAWLAEEVAKATAGLLERERETIVCLAKAAEYRDPETGAHILRMAHYSVLI 184

Query: 178 AIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIGE 237
             +LGL     E+L  A+PMHD+GK+GTPD +L KPG+L   E+ IMQQHA  G EI+ +
Sbjct: 185 GRQLGLAPAELEMLLEAAPMHDVGKVGTPDLILLKPGRLTPAEFMIMQQHAEQGYEILRQ 244

Query: 238 HGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPW 297
              P+L MA  IA  HHEKWDG+GYP GL  E IP+ GRIVA+ADVFDALTS RPYKQ W
Sbjct: 245 ARSPVLAMAAVIARAHHEKWDGSGYPQGLKGEAIPLLGRIVAVADVFDALTSPRPYKQAW 304

Query: 298 TIEATMELLENQAGQHFDPKLVEEFKQILPEVIAIRNTY 336
            +    E LE  AG+HFDP+ VE F     EV+AIR  +
Sbjct: 305 PLAQAREYLEQNAGRHFDPRCVEAFLAAWDEVLAIRERF 343