Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 423 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  170 bits (431), Expect = 5e-47
 Identities = 92/214 (42%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 112 VVKARVKTHLALYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMS 171
           V+ A + T + LY     L + V   ++E+     E+   LG A   +D++T +H  R++
Sbjct: 176 VLAAALITTVVLYPVILSLNRNVLRFSREVLRGNLEMASVLGAAIAQRDSDTSIHNYRVA 235

Query: 172 HYARLLAIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIG 231
            YA  L    G+       L   + +HD+GKIG  D +L KPGKLDAEE++IMQ H  +G
Sbjct: 236 LYACRLGEVTGVEGDAMRALIIGAFLHDVGKIGISDNILLKPGKLDAEEFRIMQTHVSLG 295

Query: 232 AEIIGEHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQR 291
             II     P LQ AR +   HHEK+DG+GY  GL  E IP+  RI A+ DVFDALTS+R
Sbjct: 296 VHIIAP--SPWLQAAREVVQFHHEKYDGSGYLQGLKGEEIPLNARIFAVVDVFDALTSRR 353

Query: 292 PYKQPWTIEATMELLENQAGQHFDPKLVEEFKQI 325
           PYK+P T EA + +L   AG HFDP+LV  F  +
Sbjct: 354 PYKEPMTCEAALAILHKDAGSHFDPRLVAAFAPV 387