Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 383 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  265 bits (676), Expect = 2e-75
 Identities = 159/366 (43%), Positives = 213/366 (58%), Gaps = 35/366 (9%)

Query: 6   TILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALV-TKTLPDLILLDVMMPGMNGYE 64
           TILVVDDT EN+ ++ G+L   ++V+VA  G RAL +  +   PDLILLDVMMP M+GY 
Sbjct: 13  TILVVDDTGENLTVIGGLLQPFFRVRVANSGMRALKVARSDPRPDLILLDVMMPEMDGYA 72

Query: 65  VCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLALY 124
           V   L+Q+P T  IPV+FVTA+    DE    +LGAVDYITKP+   ++ ARV+THL L 
Sbjct: 73  VLAELRQDPYTRDIPVMFVTAMDGDQDEEYRLSLGAVDYITKPIRPAILLARVRTHLELK 132

Query: 125 D-------QKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLL 177
           D       Q   LE +V  R +E +  +   +  L   AE +DNETG H+ R   Y   L
Sbjct: 133 DARDWLRDQNGYLEGEVSRRMRENDLIKDVSLNALALLAEKRDNETGNHLYRTQAYVEAL 192

Query: 178 AIKL--------GLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAV 229
             +L         L +   +L+  A+P+HDIGK+G PD +L KP +L  EE++IM+ H++
Sbjct: 193 MQQLQDHPRFRHALSAAQRQLIAKAAPLHDIGKVGIPDQILLKPARLTPEEFEIMKTHSL 252

Query: 230 IGAEIIG-----------------EHGDPL--LQMARRIALTHHEKWDGTGYPNGLSEEN 270
           IGAE I                  +   PL  L +AR IAL HHEKWDG+GYP GL  + 
Sbjct: 253 IGAEAIEAAIERVVGGDRARLDELQGNTPLDFLVVARHIALGHHEKWDGSGYPQGLRGDA 312

Query: 271 IPIEGRIVAIADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVI 330
           IPI  R++A+ADVFDALT +R YK+ + +E  + LL    G HFDP +V+ F  I     
Sbjct: 313 IPIPARLMALADVFDALTCKRHYKKAFPLEQAVALLVEGRGTHFDPDVVDAFLAIQDRFA 372

Query: 331 AIRNTY 336
            I   Y
Sbjct: 373 DIAQRY 378