Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 387 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  300 bits (768), Expect = 4e-86
 Identities = 162/355 (45%), Positives = 224/355 (63%), Gaps = 22/355 (6%)

Query: 4   KATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVTKTLP-DLILLDVMMPGMNG 62
           +  ILVVDDTP+N+ ++  +L + Y +KVA +G RAL +   T P DLILLD+MMP M+G
Sbjct: 10  RPVILVVDDTPDNLTLMAELLQDRYAIKVANNGERALRVAAGTPPPDLILLDIMMPDMDG 69

Query: 63  YEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLA 122
            EV + L+ +P T  IP IF+TA S++ DE QGF LGAVDYITKPVS P++ ARV THL 
Sbjct: 70  LEVARRLRADPATRDIPFIFLTARSQIEDERQGFELGAVDYITKPVSPPILLARVHTHLT 129

Query: 123 -------LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYAR 175
                  L DQ   LE +V+ RTQE+   +   I  +   AE +DNETG H+ R  +Y R
Sbjct: 130 LKAAKDFLKDQNAYLESEVQRRTQEVSMIQDVTIMAMASLAETRDNETGNHIRRTQNYVR 189

Query: 176 LLAIKLG--------LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQH 227
           +LA +L         L     ELLY ++P+HDIGK+G PD +L KPGKL  EE++IM+ H
Sbjct: 190 ILARQLQGHPRFAAFLSDANIELLYKSAPLHDIGKVGIPDRILLKPGKLTPEEFEIMKTH 249

Query: 228 AVIG------AEIIGEHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIA 281
             +G      AE+     +  L+ AR IA  H EKWDG+GYP GL  + IP+  R++A+A
Sbjct: 250 TTLGRDAILHAEVRLNSPNTFLRFARDIAYAHQEKWDGSGYPLGLRGDEIPVAARLMAVA 309

Query: 282 DVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVIAIRNTY 336
           DV+DAL S+R YK P+  E  ++++    G+HFDP +V+ F Q+  +  +I  T+
Sbjct: 310 DVYDALISRRVYKPPFPHEQAVQIISEGRGKHFDPDMVDAFLQVAEDFRSIAATF 364