Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 363 a.a., response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  221 bits (563), Expect = 2e-62
 Identities = 138/362 (38%), Positives = 202/362 (55%), Gaps = 33/362 (9%)

Query: 6   TILVVDDTPENIDILVGILGE-DYKVKVAIDGPRALALVTKTLPDL--ILLDVMMPGMNG 62
           +IL++DD P     L     + D     A +G   L ++ +    +  +++D+ M  M+G
Sbjct: 2   SILIIDDEPGLRRSLAAHFEDLDLDTLEACNGLEGLEVLREHADSIEAVIVDLNMQVMDG 61

Query: 63  YEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSA----PVVKARVK 118
                   QE     +P+I ++ +  + D       GA D+ITKP+ +         RV 
Sbjct: 62  ASFIGHATQE--APEMPIIVLSGVGVIEDAIAAMRRGAWDFITKPLHSFEMLDHTLNRVF 119

Query: 119 THLALYDQKRL----LEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYA 174
               L  + R+    LE  V++RT+ELEETR ++++RL RAAEYKDNETG HV+R+   +
Sbjct: 120 ERARLLRENRMHRENLECLVRQRTEELEETRRQVMQRLSRAAEYKDNETGRHVIRVGQIS 179

Query: 175 RLLAIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEI 234
           RLL   +GL +  C+LL   +P+HD+GKIG PD VL KPG+LD +E  IM++H + G EI
Sbjct: 180 RLLGAAMGLGTQQCDLLGECAPLHDVGKIGIPDEVLLKPGRLDDDELVIMRRHCLYGCEI 239

Query: 235 IGEHGD-----------PLLQ---------MARRIALTHHEKWDGTGYPNGLSEENIPIE 274
           +G   D           PLL+         +AR +AL HHE+WDG GYP GLS E+IP+E
Sbjct: 240 LGPLDDREAAHRICSDVPLLRDQQPFDELALARILALCHHERWDGGGYPFGLSGEDIPVE 299

Query: 275 GRIVAIADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVIAIRN 334
            RIV++ DV+DAL S RPYK     +    L+ + AG  FDP +V+ F     E+ AIR+
Sbjct: 300 ARIVSVVDVYDALCSDRPYKTAMPPDEAAILIRDGAGTQFDPAVVDAFLCHRTEIDAIRD 359

Query: 335 TY 336
            +
Sbjct: 360 RW 361