Pairwise Alignments

Query, 1765 a.a., sensory box histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 773 a.a., sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  284 bits (727), Expect = 3e-80
 Identities = 186/507 (36%), Positives = 289/507 (57%), Gaps = 30/507 (5%)

Query: 1023 SDELLVAKDEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTQLDKKQKNYLEKIE 1082
            ++EL VA+  A   ++A+  FLANMSHEIRTP+N ++GM  L L   L  +Q+  L    
Sbjct: 275  NEELEVARRTALDMAEARSAFLANMSHEIRTPLNGLLGMIALSLDGPLTAEQQQQLSIAH 334

Query: 1083 RASQSLLSIINDILDFSKIEAGKLDIENVSFQLDTMLEDLSDMFSERAAQKQIELLFAVA 1142
             + + L+ ++NDILD SK +AG+L++E + F L +++ED +++ S+ AA   +EL   + 
Sbjct: 335  DSGKVLVELLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLSQNAAPS-VELACLIK 393

Query: 1143 PNVPRHLLGDPLRLGQVLINLMNNAIKFTERGEVLLSLSLVEQQNDDVVLRFSVRDSGIG 1202
            P  P  +LGDP R+ Q++ NL++NA+KFT  G V + LS  E       +R  V D+GIG
Sbjct: 394  PQFPAQVLGDPTRVRQIVSNLLSNALKFTRFGRVDVKLSHYEGG-----VRIEVCDTGIG 448

Query: 1203 LTQEQQSKLFKSFTQADTSTTRKYGGTGLGLAISKQLVELMGGSIGVESQLGHGSTFFFT 1262
            + QE Q+++ + FTQA    TR++GGTGLGLA++  L E M G + + S+ G GS F   
Sbjct: 449  IPQEAQARILQPFTQAGAGITRQFGGTGLGLALTYNLCEAMQGRLTISSEAGFGSQFCAD 508

Query: 1263 VKL-CISSGQKLFVGQELDGMSILVADDNATARDIMRTTLESMGFNVDTVRSGDEAIMRC 1321
            + L C      +   + L G  + +   ++   +++   L   G +    RS D+ ++  
Sbjct: 509  LPLPCHLPATPV---EPLRGNVVAITASSSGLAELLGMLLPGWGLDY-VQRSIDDGLLGL 564

Query: 1322 SQQEYAVALIDWKMPNLDGIETAKQIKQQTKNAPRILMVSAHANQDFLTQIEQLGLAGYI 1381
                         M   D  E    ++  T +AP IL+V+A+ +  F+   E   LA  I
Sbjct: 565  KPD----------MLITDCPECLFNLRP-TFDAP-ILLVTAYGS--FMPSEEAAALAPLI 610

Query: 1382 SKPISASRL-LDGIMNALGRSGILPVRRHQDNIAPELLLPLKGKRILLVEDNEMNLEVAT 1440
             +    +RL L  I+    +S    +    D+   E L P +  R+LLVEDN +N  VA 
Sbjct: 611  QQARPLARLALYQILRRAMQSEATVI----DDAQIETLAPSRRGRVLLVEDNPVNQLVAK 666

Query: 1441 EFLEQVGIILSIATNGQIALDKLAQQSFDLVLMDCQMPVMDGYQATKAIRQRPELAQLPV 1500
              L ++G  +++A +G  AL +L Q+ FDLVLMDC MPVMDGY+A++ IRQ    + LP+
Sbjct: 667  GMLVKLGCEVTVAAHGAEALSQLEQRVFDLVLMDCNMPVMDGYEASRQIRQSGRWSDLPI 726

Query: 1501 IAMTANAMAGDKEMCLRAGMNDHIAKP 1527
            +A+TANAM  ++E C  AGMND+++KP
Sbjct: 727  VALTANAMPEERERCRAAGMNDYLSKP 753