Pairwise Alignments

Query, 1765 a.a., sensory box histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (653), Expect = 1e-71
 Identities = 142/368 (38%), Positives = 225/368 (61%), Gaps = 10/368 (2%)

Query: 1029 AKDEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTQLDKKQKNYLEKIERASQSL 1088
            A+ +A+ AS+AK  FLA MSHEIRTPMN ++G ++L   T L   Q++Y++ I R+ +SL
Sbjct: 459  ARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSL 518

Query: 1089 LSIINDILDFSKIEAGKLDIENVSFQLDTMLEDLSDMFSERAAQKQIELLFAVAPNVPRH 1148
            L+I+ND+LD+SKIEAG L+I +  F L  ++ +  ++   RA +K I L + +  +V ++
Sbjct: 519  LAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQY 578

Query: 1149 LLGDPLRLGQVLINLMNNAIKFTERGEVLLSLSLVEQQNDDVVLRFSVRDSGIGLTQEQQ 1208
              GD +R+GQVL NL+ N IKFT++GEV + + L     D   +RF+V DSGIG+ +E+Q
Sbjct: 579  WQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAP---DGQGIRFAVEDSGIGIAEEEQ 635

Query: 1209 SKLFKSFTQADTSTTRKYGGTGLGLAISKQLVELMGGSIGVESQLGHGSTFFFTVKLCIS 1268
            + LF +FTQAD    RK GGTGLGLAIS++LV+ MGG + + SQLG GS F+FT+ L + 
Sbjct: 636  ATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVG 694

Query: 1269 SGQK--LFVGQELDGMSILVADDNATARDIMRTTLESMGFNVDTVRSGDEAIMRCSQQEY 1326
               +       ++   ++L+ +DN     + +  L S+G  V   +S  EA +   QQ +
Sbjct: 695  EPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRF 754

Query: 1327 AVALIDWKMPNLDGIETAKQIKQQTKNAPR----ILMVSAHANQDFLTQIEQLGLAGYIS 1382
             +AL+D  +P+ +G++  + ++Q   +        + VSAH   + +      G  GY+ 
Sbjct: 755  DIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLP 814

Query: 1383 KPISASRL 1390
            KP+   +L
Sbjct: 815  KPLVKEQL 822



 Score = 65.9 bits (159), Expect = 2e-14
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 29/273 (10%)

Query: 1426 ILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLAQQSFDLVLMDCQMPVMDGYQA 1485
            +LLVEDNE+N  VA  FL  +G  +++A + Q A     QQ FD+ L+D  +P  +G   
Sbjct: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771

Query: 1486 TKAIRQRPEL---AQLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIE----VNLLYQTLL 1538
             + +RQ  +    A +P IA++A+    +    L AG + ++ KP+       +L Q L 
Sbjct: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831

Query: 1539 KYLGAPVPSLENAEFVVNESLNPLNLDVESVVKWPEHPELDIDRGLQLVQNSKRLYQRIF 1598
               G      + AE     S+     D       P      + +    V +  +  Q + 
Sbjct: 832  AKSGDDADMRDKAESHDTSSI----FDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQ 887

Query: 1599 DRFATSQRNVVDQINK------ALASNKREDAVRM---AHTLKGLAGNLSSSKLAELARQ 1649
                   R +V    +      AL   +R++  ++   AH LKG AG L  ++L +L +Q
Sbjct: 888  ILGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQ 947

Query: 1650 LELHLSENADYQVELDQIQILVASICEAIEKAK 1682
            +E   S  A YQ            + +A+E AK
Sbjct: 948  IEKADSPAAAYQ---------QTPLVDAVENAK 971