Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 473 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  277 bits (708), Expect = 6e-79
 Identities = 163/439 (37%), Positives = 247/439 (56%), Gaps = 29/439 (6%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPA--KGHGDLSSFA 63
           +L  LN ++W  + + +L+G G+  T R   +Q FR    +  +F  A  +  G LSSF 
Sbjct: 1   MLDLLNDLIWSKLLIVMLIGLGLLFTIRSGFVQ-FRYFGNMFTIFGHAFERQPGQLSSFQ 59

Query: 64  ALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDAR 123
           AL  +++  +G GNI GV+ AI +GGPGA+FWMW+ A  GMAT Y EC LA  Y+  +  
Sbjct: 60  ALMLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMATSYFECSLAQLYKRREPD 119

Query: 124 GQIAGGPMYYIERGLGLRWM---AKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVPT 180
           G   GGP +YI+ GLG RW+     +  L   G  F  + +F   +++ D     F VPT
Sbjct: 120 GTYRGGPAFYIQHGLGQRWLGIVVSILLLMTFGFGFNAVQSFTVASSLHD----TFGVPT 175

Query: 181 WTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVV 240
             + + LTL++A +  GG++RI+  A  LVP M+  Y+   ++++     AI     L+ 
Sbjct: 176 VASGIALTLVIAGIIFGGIRRIAKWADVLVPVMAFSYLAMALFVIGSNFSAIPETFGLIF 235

Query: 241 ESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSM 300
            SAF    A  G +GA    AI MG+ RG+FSNE+GLGSAP  AA A+   PV QG+V  
Sbjct: 236 RSAFGLEQAFAGGIGA----AILMGVKRGLFSNEAGLGSAPNVAAVAEVKHPVAQGIVQS 291

Query: 301 TGTFFDTIIICTMTGLVLIITGVWSG--DTAGAAMTSAAFSLGGSAAIGQY---LVTIAL 355
              F DTII+C+ T L+++++GV+    D AG  +T  A     +A +G++    V++AL
Sbjct: 292 LSVFIDTIILCSCTALIILLSGVYEPGMDQAGVVLTQTAV----AAVVGEWGRVFVSVAL 347

Query: 356 VCFAFTTILGWHYYGERCWYYLVGER-GLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNG 414
           + F FTT++  +Y GE    +   +R  +  Y+I+ + L+  G+   L  ++  AD   G
Sbjct: 348 LLFVFTTLIYNYYLGENALGFFTEKRMPVVIYRILVVILVLWGSVQDLGTVFAFADVTMG 407

Query: 415 LMAIPNLIAI-----IGLR 428
           L+AI NLIA+     +GLR
Sbjct: 408 LLAIANLIAVALLFKVGLR 426