Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  444 bits (1142), Expect = e-129
 Identities = 224/443 (50%), Positives = 305/443 (68%), Gaps = 8/443 (1%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLF----KPAKGHGDLSS 61
           L++S+NG+VWGP  L L++GTG++L   LK + + R+P   +L++    K  +  G++S 
Sbjct: 7   LVNSVNGLVWGPPMLVLILGTGLFLMIFLKFMPLTRIPTGFALMWRGRTKGDEATGEISP 66

Query: 62  FAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTD 121
           F AL T+L+AT+GTGNI GVATAI +GGPGALFWMW  A  GMATKY E +LAV YR  D
Sbjct: 67  FQALMTSLAATVGTGNIAGVATAIFLGGPGALFWMWCTALVGMATKYCEVVLAVHYREKD 126

Query: 122 ARGQIAGGPMYYIERGLGLRW--MAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVP 179
            RG+  GGPMY I+ GLG +W  +   FA+FG G+A FGIG   QVN+++ AL   F VP
Sbjct: 127 DRGEHVGGPMYAIKNGLGKKWIWLGTAFAIFG-GLAGFGIGNMVQVNSMAHALETTFAVP 185

Query: 180 TWTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLV 239
            W T LV  ++V  V LGG++RI  VA  LVP M + Y++A   +L+    AI  A  L+
Sbjct: 186 LWATGLVTMVIVGLVILGGIRRIGVVAASLVPFMCLAYLIAAAVVLVVNVSAIPAAFDLI 245

Query: 240 VESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVS 299
              AFTP++A GGF GA V  AI+ G+ARG+FSNE+GLG+A IA AA  T   V  G++ 
Sbjct: 246 FTHAFTPIAATGGFAGAAVMAAIRFGVARGIFSNEAGLGTAGIAQAAGTTTSSVRSGMIG 305

Query: 300 MTGTFFDTIIICTMTGLVLIITGVWSGDTAGAAMTSAAFSLGGSAAIGQYLVTIALVCFA 359
           M GTF DTII+C+MTGL +I TGVW+   +GAA+++AAF       IG  ++TIALV FA
Sbjct: 306 MLGTFIDTIIVCSMTGLAIICTGVWTSGESGAALSAAAFE-SAMPGIGGIILTIALVVFA 364

Query: 360 FTTILGWHYYGERCWYYLVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIP 419
           FTTILGW Y+GE+CW +LVG R +  ++++++  +  GA  +LD  WLLADT+NGLMAIP
Sbjct: 365 FTTILGWSYFGEKCWEFLVGTRAIWPFRVIWVLAVPFGAIAQLDFAWLLADTLNGLMAIP 424

Query: 420 NLIAIIGLRHIIIAETQSYFVRT 442
           NLI+++ L  +++  T+ YF R+
Sbjct: 425 NLISLLLLSPVVVKLTKEYFARS 447