Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (817), Expect = 1e-91
 Identities = 178/440 (40%), Positives = 263/440 (59%), Gaps = 9/440 (2%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKG-HGDLSSFAA 64
           L++ +N ++WG I + LLVG G+Y T RL  IQ        ++L    K  +  +SSF A
Sbjct: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63

Query: 65  LCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARG 124
           LCT+L+A +GTGN+ GVA A+  GGPGA+FWMWL A  GMAT +AE  LA  Y+T D  G
Sbjct: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123

Query: 125 QIAGGPMYYIERGLGLRWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVPTWTTA 184
              GGP YY+E+GLG+RWM  LF++F + +AF  +    Q N+I++A+  AF        
Sbjct: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLI-IAFGLVFNAVQANSITNAMKTAFGFEPMLIG 182

Query: 185 LVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVESAF 244
           + + LL A V  GG+++I+  A+ +VP M+  Y+   +++++   E +  A+ L+ +SAF
Sbjct: 183 IGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAF 242

Query: 245 TPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAK--TNEPVEQGLVSMTG 302
               AA G LG  +AQA+  G+ RG+FSNE+G+GSAP AAA+A      P  QG V M G
Sbjct: 243 GLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLG 302

Query: 303 TFFDTIIICTMTGLVLIITG--VWSGDTAGAAMTSAAFSLGGSAAIGQYLVTIALVCFAF 360
            F DTI+ICT T  +++++G  V  G+  G  +T  A S       G   +  A+  FAF
Sbjct: 303 VFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALS-SQVGDWGGIFIAFAIFFFAF 361

Query: 361 TTILGWHYYGERCWYYLV--GERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAI 418
           T+I+  + Y E    +L    ++GL  +++VFLG++  G+   L  +W +AD   GLMAI
Sbjct: 362 TSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAI 421

Query: 419 PNLIAIIGLRHIIIAETQSY 438
            NL+AI+ L  I+I   + Y
Sbjct: 422 VNLVAILLLSGIVIKLAKDY 441