Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (648), Expect = 6e-72
 Identities = 167/459 (36%), Positives = 242/459 (52%), Gaps = 51/459 (11%)

Query: 4   QALLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGHGDLSSFA 63
           Q+ +  LNGI+W P  + L +G G++ +   + +QV        LL    +    +SSF 
Sbjct: 2   QSFVDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKGISSFQ 61

Query: 64  ALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDAR 123
           AL  +LS  +GTGNI GVA AI  GGPGA+FWMW+ AFFG AT YAE  LA  Y+  D  
Sbjct: 62  ALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-N 120

Query: 124 GQIAGGPMYYIERGLGLRWMAKLFA---LFGVGVAFFGIGTFAQVNAISDALTIAF-DVP 179
           G+  GGP YYIE+ +G +W A +FA   +F  GV   G+    Q N+I +A+  AF   P
Sbjct: 121 GEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGV----QSNSIGNAVESAFGSGP 176

Query: 180 TWTTAL------------VLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVL-ACVWILL 226
              TAL            V+++L+  +  GGVKRI++  Q +VP M++ Y++ A V ILL
Sbjct: 177 MIETALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILL 236

Query: 227 GFAEAILPALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAA 286
              E +   + ++V  AF+P++  G         AI  G+ RGV+SNE+G G+ P AAAA
Sbjct: 237 NIGE-VPRIIAMIVGDAFSPMAGVGA--------AIGWGVKRGVYSNEAGQGTGPHAAAA 287

Query: 287 AKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLIITGVWSGDTAGAAM------------T 334
           A    P +QGLV     + DT+++C+ T  +++ITG ++   A   M            +
Sbjct: 288 ASVEHPAQQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIAS 347

Query: 335 SAAFSL----GGSAAIGQYLVTIALVCFAFTTILGWHYYGERCWYYL---VGERGLR-AY 386
           S AF+          IG+  V  AL  FAFTTIL ++Y  E    Y+       GL    
Sbjct: 348 SPAFTQIAVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVL 407

Query: 387 QIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIPNLIAII 425
           ++V +  +  G     ++ W L D   GLMA  N++ II
Sbjct: 408 KLVLMASVFYGTVKTANLAWALGDVGVGLMAWLNIVGII 446