Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 472 a.a., amino acid carrier transmembrane protein from Sinorhizobium meliloti 1021

 Score =  286 bits (733), Expect = 8e-82
 Identities = 172/445 (38%), Positives = 248/445 (55%), Gaps = 18/445 (4%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKP-AKGHGDLSSFAA 64
           ++  LN I WG + +  L+  G+Y T RL   Q+        +L +  +K    +S F A
Sbjct: 4   IIGFLNTIFWGYVLIYGLLAVGLYFTVRLGFPQIVHFSEMFRVLSRGGSKDAAGISPFQA 63

Query: 65  LCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARG 124
           L  +L++ +GTGN+ GVA A+ +GGPGA FWMW+ AF GMAT YAE  LA  Y+  +  G
Sbjct: 64  LMVSLASRVGTGNLAGVAVALYLGGPGATFWMWIVAFVGMATAYAESALAQLYKIRNEDG 123

Query: 125 QIAGGPMYYIERGLGLRWMAKLFA---LFGVGVAFFGIGTFAQVNAISDALTIAFDVPTW 181
           Q  GGP +YI RGL   W A +F+   +   G+ F  +    Q N+I+DA+  AF VP  
Sbjct: 124 QYRGGPAFYIARGLNAPWAATIFSACLILSFGLVFNAV----QANSIADAVQGAFGVPKL 179

Query: 182 TTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVE 241
              + + LL   V  GG+++I+ VA+ +VP M+  Y+L  V++L+  A A+   L  ++ 
Sbjct: 180 AVGVAVALLSGVVIFGGIRQIARVAEIVVPFMAAAYLLTAVYVLIANASAVPGVLWTIIS 239

Query: 242 SAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAK--TNEPVEQGLVS 299
           SAF    AAGG  G  +A A+  G+ RG+FSNE+G+GSAP  AA A    + P  QG V 
Sbjct: 240 SAFGFQEAAGGITGG-IAAAMLNGVKRGLFSNEAGMGSAPNIAAVATPVPHHPSSQGFVQ 298

Query: 300 MTGTFFDTIIICTMTGLVLIITGVW--SGDTAGAAMTSAAFSLG-GSAAIGQYLVTIALV 356
             G F DTI+ICT T ++++++G         G  +T AA S   GSA  G Y + IA+ 
Sbjct: 299 SLGVFIDTILICTATSVMILLSGTLEPGSGVTGTQLTQAAMSTHIGSA--GTYFIAIAIF 356

Query: 357 CFAFTTILGWHYYGERCWYYLVG--ERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNG 414
            FAFT+I+G + Y E    YL G    GL   +   L ++  GA+  +  ++  AD   G
Sbjct: 357 FFAFTSIIGNYSYAENALTYLGGGNRLGLMIMRCATLAMVVWGAYESITTVFDAADASMG 416

Query: 415 LMAIPNLIAIIGLRHIIIAETQSYF 439
           LMA  NL+AI+ L   I   T+ YF
Sbjct: 417 LMATINLVAILLLSGTIAKLTKDYF 441