Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 467 a.a., amino acid carrier protein from Sinorhizobium meliloti 1021

 Score =  439 bits (1128), Expect = e-127
 Identities = 222/436 (50%), Positives = 300/436 (68%), Gaps = 8/436 (1%)

Query: 10  LNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAK----GHGDLSSFAAL 65
           LNGIVWG   + L++GTG+YL  RL  + + ++     ++ K  +      G+++ +AAL
Sbjct: 11  LNGIVWGVPMIVLIIGTGLYLQLRLGFMPIRKVAYGFRMILKSRRPGRAAEGEITPYAAL 70

Query: 66  CTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQ 125
            TALSATIGTGNI GVATAI +GGPGALFWMW+ AF GMATKYAE ++AVKYR  D +G+
Sbjct: 71  MTALSATIGTGNIAGVATAIAVGGPGALFWMWVTAFVGMATKYAEVVVAVKYREVDDKGE 130

Query: 126 IAGGPMYYIERGLGL--RWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVPTWTT 183
            AGGPM+ I+ GLG   +W+   FA+FG G+A FGIG   Q N I+ A+  AF + TW +
Sbjct: 131 HAGGPMFAIKNGLGKHWQWLGTAFAIFG-GLAGFGIGNMVQANGIASAVENAFGIETWIS 189

Query: 184 ALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVESA 243
            +V+T+L  AV LGG+KRI  VA+K+VP M+I Y++    +L+ FA  I  A+  +   A
Sbjct: 190 GIVMTVLTGAVILGGIKRIGAVAEKVVPFMAIFYLVCVAAVLVVFAGNIPQAIATIFTQA 249

Query: 244 FTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGT 303
           F+P +A GGFLG+TV  AI+MG+ARG+FSNE+GLG+A IA AA  T  PV  G++ M GT
Sbjct: 250 FSPTAATGGFLGSTVLMAIRMGVARGIFSNEAGLGTAGIAQAAGSTANPVFSGVIGMMGT 309

Query: 304 FFDTIIICTMTGLVLIITGVWSGDTAGAAMTSAAFSLGGSAAIGQYLVTIALVCFAFTTI 363
           F DTII+CT+TGL ++++GVW+    GA ++SAAF        G YLVTI+L  FAFTTI
Sbjct: 310 FIDTIIVCTLTGLAIMVSGVWASGETGAVLSSAAFE-AALPGYGNYLVTISLALFAFTTI 368

Query: 364 LGWHYYGERCWYYLVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIPNLIA 423
           LGW YY E+CW YL+G      ++IV+   +  GA + LD  WL+ADT+N LMAIPNLI+
Sbjct: 369 LGWAYYAEKCWEYLIGTASAIPFRIVWTVAVFFGATLSLDFAWLVADTLNALMAIPNLIS 428

Query: 424 IIGLRHIIIAETQSYF 439
           ++ L  +I   T+ YF
Sbjct: 429 LLLLSPVIAQLTRDYF 444