Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

 Score =  423 bits (1088), Expect = e-123
 Identities = 225/449 (50%), Positives = 305/449 (67%), Gaps = 18/449 (4%)

Query: 1   MNFQALLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAK---GHG 57
           M+F +L++++N  VWGP  L LL+GTG++LT RL  +Q+  LP AL L F   +     G
Sbjct: 1   MDFVSLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEG 60

Query: 58  DLSSFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKY 117
           D+S F AL TAL+ATIGTGNI GVATA  +GGPGA+FWMW+ AFFGMATKYAE +LA+KY
Sbjct: 61  DISHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKY 120

Query: 118 RTTDARGQIAGGPMYYIERGLGLRWMAKL----FALFGVGVAFFGIGTFAQVNAISDALT 173
           RT D  G++AGGPMY++E+GL    + K+    FA FG   A FGIG   Q N+++DA+ 
Sbjct: 121 RTVDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFG-AFAAFGIGNMVQTNSVADAVA 179

Query: 174 IAFDVPTWTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAIL 233
             F V    T  VL +  AAV LGG+K I      +VP M++ Y+LA + IL      I+
Sbjct: 180 SNFGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYII 239

Query: 234 PALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPV 293
           PA   +  SAF   + + GF GA +  AI  G+ RGVFSNE+GLGSAPIAAAAAKT+ P 
Sbjct: 240 PAFGTIFSSAF---NFSAGF-GALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAKTDHPG 295

Query: 294 EQGLVSMTGTFFDTIIICTMTGLVLIITGVWS----GDTAGAAMTSAAFSLGGSAAIGQY 349
            Q LVSMTGTF DTI++CT+TGLVL I G+ +     D  GA++T+A+F       +G  
Sbjct: 296 RQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFD--ALMPMGGL 353

Query: 350 LVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLA 409
           +VTI LV FA++T+LGW YYGE+C+ YL+G +G+R Y+I F+ +   GA   L ++W +A
Sbjct: 354 IVTIGLVFFAYSTVLGWSYYGEKCFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVWNIA 413

Query: 410 DTVNGLMAIPNLIAIIGLRHIIIAETQSY 438
           DT+NG MAIPNLI ++ L  ++++ET+++
Sbjct: 414 DTLNGAMAIPNLIGLLLLSGVVVSETKAF 442