Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 468 a.a., sodium/alanine symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  555 bits (1429), Expect = e-162
 Identities = 277/438 (63%), Positives = 347/438 (79%), Gaps = 4/438 (0%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGH---GDLSSF 62
           L  S+N  VWGP  L LLVGTG+YLT RL L+QV RLP+AL  +F     H   GD+SSF
Sbjct: 6   LFESVNAFVWGPPLLALLVGTGIYLTIRLGLLQVVRLPLALRYVFGRDDEHHEEGDVSSF 65

Query: 63  AALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDA 122
           AALCTAL+ATIGTGNIVGVATA+  GGPGALFWMW+AAFFGMATKYAE +LAVKYR TDA
Sbjct: 66  AALCTALAATIGTGNIVGVATAVAAGGPGALFWMWVAAFFGMATKYAEGLLAVKYRVTDA 125

Query: 123 RGQIAGGPMYYIERGLGLRWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVPTWT 182
            GQ++GGPMYY+ERGLG R +A+ FAL G+ VAFFGIGTFAQVNAI DA +++  +P   
Sbjct: 126 NGQMSGGPMYYLERGLGSRMLARAFALCGILVAFFGIGTFAQVNAIKDAASLSLGIPPLA 185

Query: 183 TALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVES 242
           TA+VLT  VA VTLGG++ I+ VA+K+VP M++ Y++A   +L+   + I  A+ +++ S
Sbjct: 186 TAVVLTTTVALVTLGGLRSIARVAEKVVPFMAVFYIIASCAVLVMHLDRIPDAVMVILHS 245

Query: 243 AFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTG 302
           AF P +A GG  G TV  A++ G+ARGVFSNESGLGSAPIAAAAA+T   V QGL+SMTG
Sbjct: 246 AFNPQAALGGAAGMTVLTAMRAGVARGVFSNESGLGSAPIAAAAARTKSCVRQGLISMTG 305

Query: 303 TFFDTIIICTMTGLVLIITGVWSG-DTAGAAMTSAAFSLGGSAAIGQYLVTIALVCFAFT 361
           TFFDTI+ICTMTGLVL++TGVW+    AGAAMT+AAF+ G  +++GQY  T+ L+ FAFT
Sbjct: 306 TFFDTIVICTMTGLVLVVTGVWNDPQLAGAAMTNAAFAAGLESSLGQYAATLGLILFAFT 365

Query: 362 TILGWHYYGERCWYYLVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIPNL 421
           TILGW+YYGERC  YL G RG+  Y++VF+GL+A GAF+ L++IW+LAD VNGLMAIPNL
Sbjct: 366 TILGWNYYGERCTEYLFGVRGILPYRLVFIGLVAAGAFVHLELIWVLADIVNGLMAIPNL 425

Query: 422 IAIIGLRHIIIAETQSYF 439
           I ++GL  +IIAET+++F
Sbjct: 426 IGLLGLSGVIIAETRAFF 443