Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 462 a.a., amino acid carrier protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  267 bits (682), Expect = 6e-76
 Identities = 166/447 (37%), Positives = 246/447 (55%), Gaps = 22/447 (4%)

Query: 1   MNFQALLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGHGD-- 58
           MNF   ++ +N I+W  I + +L+G  V+ + R + +Q FR+   + +L   + G G   
Sbjct: 1   MNF---INEINDILWTYILIIMLLGCAVWFSIRTRFVQ-FRMLREMIILLSESAGKGKQG 56

Query: 59  ---LSSFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAV 115
              +SSF A    +++ +GTGN+ GVATAI +GGPGA+FWMW+ A  G ++ + E  LA 
Sbjct: 57  EKHVSSFQAFAITIASRVGTGNLAGVATAIAIGGPGAVFWMWVIALLGASSAFIESTLAQ 116

Query: 116 KYRTTDARGQIAGGPMYYIERGLGLRWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIA 175
            Y+    +    GGP YY+++GL   WM  LFA+  + + F       Q N I  A   A
Sbjct: 117 LYKIR-GKDSFVGGPAYYMKKGLKQPWMGILFAVL-ISITFGFAFNSVQSNTICAAAEHA 174

Query: 176 FDVPTWTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYV-LACVWILLGFAEAILP 234
           F         VLT L   +  GG++RI++V+  +VP M++GYV LA V +LL      LP
Sbjct: 175 FGFNHTVLGGVLTALTLVIIFGGIRRIAHVSSIIVPVMALGYVGLALVIVLLNITH--LP 232

Query: 235 -ALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPV 293
             + L++  AF    A GG +G     A+  GI RG+FSNE+G+GSAP AAA A    PV
Sbjct: 233 EVISLIISHAFGWEQALGGGVG----MALMQGIKRGLFSNEAGMGSAPNAAATANVTHPV 288

Query: 294 EQGLVSMTGTFFDTIIICTMTGLVLIITGV-WSGDTAGAAMTSAAFSLGGSAAIGQYLVT 352
           +QGL+     F DT++ CT T  +++ +G    G + G  +T  A +     A G   V 
Sbjct: 289 KQGLIQTLAVFTDTLLNCTCTAFIILFSGAPLDGSSNGVQLTQQALT-NEIGASGSIFVA 347

Query: 353 IALVCFAFTTILGWHYYGERCWYYLVGERG-LRAYQIVFLGLIAGGAFIKLDVIWLLADT 411
           +AL  FAF++ILG +YYGE    ++  ++  L  Y+I+  G++  G+   LD++W LAD 
Sbjct: 348 VALFFFAFSSILGNYYYGEANIRFITAKKWVLHTYRILVSGMVLFGSVATLDLVWSLADI 407

Query: 412 VNGLMAIPNLIAIIGLRHIIIAETQSY 438
              LMA+ NLIAII L    I     Y
Sbjct: 408 TMALMAVCNLIAIIFLGKYAIRLLSDY 434