Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 494 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  275 bits (702), Expect = 3e-78
 Identities = 164/455 (36%), Positives = 250/455 (54%), Gaps = 33/455 (7%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGHGDLSSFAAL 65
           +++++N IVW P  + L +G G++ + R + +Q+  LP  + L+F        +SSF AL
Sbjct: 4   IVNAVNNIVWSPALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMFDGKSTDAGVSSFQAL 63

Query: 66  CTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQ 125
              L+  +GTGNI GVATAI  GGPGALFWMW+ AF G ++ + E  L   Y+     G+
Sbjct: 64  AMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYK-EKINGE 122

Query: 126 IAGGPMYYIERGLGLRWMAKLFA---LFGVGVAFFGIGTFAQVNAISDALTIAFDVPTWT 182
             GGP +YIE+GLG++W A  FA   +F  G+   G+    Q N+I  +L  AFD+    
Sbjct: 123 YRGGPAFYIEKGLGMKWYAWTFAIATIFACGILLPGV----QANSIGSSLKTAFDIDPNV 178

Query: 183 TALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVL-ACVWILLGFAEAILPALQLVVE 241
           TA +L +L+  +  GGVKRI++ A  +VP M++GY++ ACV I L   + +   + L+++
Sbjct: 179 TAAILAMLLGFIIFGGVKRIAHFASTVVPFMALGYIIVACVIIALNIGQ-LPDIIMLILK 237

Query: 242 SAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMT 301
           SAF       GF GA +  AI  G+ RG++SNE+G G+ P A++AA  + P +QGLV   
Sbjct: 238 SAF---GLDAGF-GAILGLAIMWGVKRGIYSNEAGQGTGPHASSAAAVSHPAKQGLVQAF 293

Query: 302 GTFFDTIIICTMTGLVLIITGVWS--GDTAGAAMTSAAFSLGGSAAI-----------GQ 348
             + DT+ +C+ TG +L+ITG+++  G    A  T  A    G   +           G 
Sbjct: 294 SVYVDTLFVCSATGFMLLITGLYNVQGPDGAALYTGIAGVAAGPGYVQTAMESMMPGFGN 353

Query: 349 YLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRAY-----QIVFLGLIAGGAFIKLD 403
             V +AL  FAFTTI+ ++Y  E    Y +  +  R +     ++V +     G     D
Sbjct: 354 MFVAVALFFFAFTTIVAYYYIAETNIAY-INRKANRPWLTVVLKVVLMASTVYGTVKTAD 412

Query: 404 VIWLLADTVNGLMAIPNLIAIIGLRHIIIAETQSY 438
           + W + D   GLMA  N+IAII L+ I     + Y
Sbjct: 413 LAWGMGDIGVGLMAWLNIIAIILLQRIAFTCLKDY 447