Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (360), Expect = 3e-39
 Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 4/215 (1%)

Query: 10  VSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSGQIVLNH 69
           + K +  G Q    L+ V   + QGE +AL GPSGSGKSTLLN++   +    G++ L  
Sbjct: 7   IEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQGEVALEG 66

Query: 70  QSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDS---WNPWCDYLV 126
           +   + + +  +  RRT  G VFQ+FNL++ +    N+ + L LNG S    +     ++
Sbjct: 67  RVYPR-KGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDML 125

Query: 127 EKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVMSLLCE 186
            K+GL A++ ++ + LSGGQQQRVAIARAL HNP L++ADEPT +LD ++   V+SL+  
Sbjct: 126 TKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLVISLMKS 185

Query: 187 LAKESQTSILMVTHSEECAAFMNKRWHLSHAAVSI 221
           L  E  T+ ++ TH    AA  ++  +L    +S+
Sbjct: 186 LGHELGTTFVVATHDGRMAAQCDRTLNLVDGQISL 220