Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (346), Expect = 1e-37
 Identities = 75/206 (36%), Positives = 123/206 (59%), Gaps = 1/206 (0%)

Query: 10  VSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSGQIVLNH 69
           +SK     ++  T+L+ V+L++  GE++A+ G SG+GKSTL+ L+AG +T   G++ L  
Sbjct: 11  LSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEGEVYLLG 70

Query: 70  QSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDSWN-PWCDYLVEK 128
           +  ++  D   +  R   +G VFQ F L+  L+   N+     L G++ +      L++ 
Sbjct: 71  KPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEAEDRERAQKLLKA 130

Query: 129 LGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVMSLLCELA 188
           +GL   ++     LSGG+QQRVAIARA   +P +L ADEPTGNLD E+  +V+ LL EL 
Sbjct: 131 VGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKVIDLLFELN 190

Query: 189 KESQTSILMVTHSEECAAFMNKRWHL 214
           +E  T++++VTH  + A    +R+ +
Sbjct: 191 REHGTTLVLVTHDPKLAQRCQRRFFM 216