Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 7e-41
 Identities = 81/217 (37%), Positives = 128/217 (58%), Gaps = 3/217 (1%)

Query: 1   MSEVAKLIQVSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETV 60
           M+ + +  QV K++++GE +  VL+ V   L +GE +++ G SGSGKSTLL+++   +  
Sbjct: 1   MNNLLRCHQVCKTYQEGELQTQVLKGVSFELKRGELVSIIGSSGSGKSTLLHILGALDDA 60

Query: 61  DSGQIVLNHQSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDSW-- 118
             GQ+    QS  +    + ++ R  HLG V+Q  +LL   +   N+   L + G +   
Sbjct: 61  SEGQVEFLGQSLHQLSSNKQAKIRNQHLGFVYQFHHLLADFSALENVAMPLLIGGMNVAK 120

Query: 119 -NPWCDYLVEKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESG 177
                  L+E++GL   +  +   LSGG++QRVAIARAL + P L+LADEPTGNLD ++ 
Sbjct: 121 AKAKAQSLLERVGLGHRVAHRPSELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTA 180

Query: 178 KQVMSLLCELAKESQTSILMVTHSEECAAFMNKRWHL 214
             +  L+ EL +ES T+ L+VTH  E AA M++  H+
Sbjct: 181 LSIYDLMRELNRESGTAFLVVTHDGELAAKMDRHMHM 217