Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (435), Expect = 6e-48
 Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 3/206 (1%)

Query: 6   KLIQVSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSGQI 65
           +LI + K + DG++ H VLQ  +LTL+QG+ +AL G SGSGKSTLLNLIAG ++ DSG+I
Sbjct: 3   QLIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSGEI 62

Query: 66  VLNHQSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNG--DSWNPWCD 123
                      +   + FRR ++G +FQQ+NLL  LN+ +NI F   L G  +    W  
Sbjct: 63  WFPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPEDAGLWRQ 122

Query: 124 YLVEKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVMSL 183
            L   L L  LL R  E +SGGQQQR AIARAL   P +LLADEPTG+LD+ + + VM L
Sbjct: 123 IL-SALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAVMRL 181

Query: 184 LCELAKESQTSILMVTHSEECAAFMN 209
           L  L ++   ++L+VTHSE+ A  M+
Sbjct: 182 LTTLTRQLNCALLLVTHSEKVAQHMD 207