Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 8e-38
 Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%)

Query: 4   VAKLIQVSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSG 63
           + +L Q+ K +  G+     L  VDLT+  GE +A+ GPSGSGKSTL+N++   +   +G
Sbjct: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68

Query: 64  QIVLNHQSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNG---DSWNP 120
           +  L+         +Q +  R   +G VFQ FNLL   +  +N+   L   G        
Sbjct: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128

Query: 121 WCDYLVEKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQV 180
               L+ ++GLA  L+ +   LSGGQ+QRVAIARAL + P +LLADEPTG LD +SG ++
Sbjct: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188

Query: 181 MSLLCELAKESQTSILMVTHSEECA 205
            +L  EL +E +T I++VTH  E A
Sbjct: 189 EALFNELHREGRT-IIVVTHDNELA 212