Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  148 bits (373), Expect = 1e-40
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)

Query: 10  VSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSGQIVLNH 69
           V K++  GE +  VL+ V+L + +GE + + GPSG GKSTL+N++   +    G + +  
Sbjct: 9   VIKTYGVGEAKSNVLKGVNLKIEEGEFVMIMGPSGCGKSTLMNVLGLLDVPSKGDVYIKG 68

Query: 70  QSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDSWN---PWCDYLV 126
           + TTK  + + + FRR   G +FQQF+L+  L    N+   + L+G            L+
Sbjct: 69  KKTTKMNENERAVFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKEETFRQKRAKELL 128

Query: 127 EKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVMSLLCE 186
             +GL+   N +   LSGGQQQRVAIAR+L++NP LL ADEPTGNLD +SGKQVM +L  
Sbjct: 129 NIVGLSERENYKPSQLSGGQQQRVAIARSLSNNPKLLFADEPTGNLDSKSGKQVMEILEN 188

Query: 187 LAKESQTSILMVTHSEECAAFMNK 210
           L  E  T I+MVTH      +  K
Sbjct: 189 LHNEGMT-IVMVTHDSYMIKYATK 211