Pairwise Alignments

Query, 425 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 372 a.a., hydroxyneurosporene synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 7e-48
 Identities = 109/374 (29%), Positives = 168/374 (44%), Gaps = 34/374 (9%)

Query: 56  ESKSMGALLGQTKEGETTSTQQAFAKVTPEHQFHFPQDHLAHNGFRQEWWYLTANLTTEK 115
           E     ++L  + + E ++ Q  F  V P H    P D  +   F QEWW L A L  E+
Sbjct: 29  EQDEYHSMLLHSADPEHSTVQAVFEPVLPNHPVRLPTDFASRPEFEQEWWRLYALLEDEQ 88

Query: 116 GEQLGAQWTQFRVALKPQYTESQNAQPTTLKSAWATEQLYFAHSALTSSAAHLAHEKWSR 175
           G  L  QW   R+A        Q+ + T     W T QLYF+   +      L  +K +R
Sbjct: 89  GNPLSVQWNFLRLA--------QDERDTL---GWQTPQLYFSSIVINGKKVSLRDQKIAR 137

Query: 176 GHPKLAGVNANPYQIHLDNWQLQSESNALFPAILRVETADFSYELTLTSQAPLQYQGDNG 235
           G    AG+   P+++ +DNW  +S      P  L + T  F+  L L +  P    GD G
Sbjct: 138 GGIGQAGMGDQPFRMWIDNWTWRSLGMGPLPGNLHLSTDHFALNLQLRALGPYVLSGDRG 197

Query: 236 YSIKNREGNVASYYYSQPFITITGQITRHININGQAENRVEKVTGQGWLDREWSSQFLTK 295
           Y +K    ++ASY +  P+I + G +          E    +V G  WL +EW S+ +  
Sbjct: 198 YQVKQELLSLASYQFQLPYIAVHGDLV------VSPELPALRVRGHAWLSKEWGSELVAN 251

Query: 296 SQQGWDWFALRLNDGSALMLFQLREQSTDKTQTPSAFYSARRMFADGTGRNINSRDTP-- 353
             +G D F + LND   L + + R +       P + Y        G   N+N +     
Sbjct: 252 DLEGTDSFVIPLNDKQWLTVNRFRHRG-----VPDSVY--------GMLHNLNGKSVALL 298

Query: 354 -DGIKMTPLGWQTTRTGK-YPVSWQVQIPSEQIDIRISPLNPNSAMALSTSYWEGPIKLS 411
              I++  L   +   GK  P+ W++ IP  Q+++ I PL+ ++       YWEG IK+ 
Sbjct: 299 NRDIQLEALSSSSLSNGKRVPLRWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVL 358

Query: 412 GSHTGMGYMELTGY 425
           GSH   G+M+L+GY
Sbjct: 359 GSHNQTGFMQLSGY 372