Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 148 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

 Score = 83.6 bits (205), Expect = 1e-21
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 23/139 (16%)

Query: 4   LQKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGL 63
           L +GFTLIELMI VAIIGI+AAIA P++ EY++  +R DA+  L+     +ER+Y+ NG 
Sbjct: 10  LNRGFTLIELMIVVAIIGIIAAIAYPNYQEYVRSAKRADAETALMELGHFMERYYTANGK 69

Query: 64  YPASQSLA------------NSPYYSFSY---TPTADKFGFSLKAVPT-NRQSDPCGTLS 107
           Y  +   A            ++  Y+  +    PTA K  + L+AVP  +  +D CGTL+
Sbjct: 70  YLKADGSAPALPFTEAPKDGSTKVYTLGFAAGNPTASK--YVLQAVPKGSMANDKCGTLT 127

Query: 108 LDHKGVR-----VPATNCW 121
           L + G +     +    CW
Sbjct: 128 LSNTGAKGQKAGMTVAECW 146