Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 147 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 58.9 bits (141), Expect = 3e-14
 Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 20/134 (14%)

Query: 5   QKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGLY 64
           Q+G TLIELMIAV I+G+LA+IA P++  Y+K+G R  A   +      LE  Y +NG Y
Sbjct: 16  QQGMTLIELMIAVVIVGVLASIAYPAYTNYVKEGHRKQAMADMAKIQLYLEEKY-QNG-Y 73

Query: 65  PASQSLANSPYYSFSYTPTADKF---------GFSLKAVPTN---RQSDPCG-----TLS 107
            A+  +      +   +  +D++          +++ A P +   + SD C      +L+
Sbjct: 74  TATGIVDAQKVCNSFCSVDSDRYKIVVETAATSYAITATPQSSKGQNSDQCDGSAYTSLT 133

Query: 108 LDHKGVRVPATNCW 121
           L+ KGV  P   CW
Sbjct: 134 LNEKGVTSP-IGCW 146