Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 132 a.a., type IV pilus biogenesis protein PilE (RefSeq) from Shewanella amazonensis SB2B

 Score = 71.2 bits (173), Expect = 5e-18
 Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 2   NTLQKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRN 61
           N+ + GFTLIELMI VAI  ILAAIA PS+  Y+ +  R +    ++  A   E++Y  N
Sbjct: 3   NSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYLDN 62

Query: 62  GLY---------PASQSLANSPYYSFSYTPTADKFGFSLKAVPTNRQSD-PCGTLSLDHK 111
             Y          AS  +  + YYS +   T+  F  +  A  T    D  CGT++L   
Sbjct: 63  RAYATDMTKLGLSASPFVTENGYYSVASAGTS-SFTITATAAGTQASRDSTCGTITLTSA 121

Query: 112 GVRVPATNCW 121
           GV+ P+  CW
Sbjct: 122 GVKGPSAECW 131