Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 154 a.a., general secretion pathway protein G from Burkholderia phytofirmans PsJN

 Score = 59.7 bits (143), Expect = 2e-14
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 10/104 (9%)

Query: 5   QKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGLY 64
           Q+GFTLIE+M+ +AI+GILAA+ +P       + RR  A+Q + T  QAL+ +   NG Y
Sbjct: 19  QRGFTLIEIMVVIAILGILAALIVPKIMSRPDEARRVAAKQDIGTMMQALKLYRLDNGRY 78

Query: 65  PASQ----SLANSPYYSFSYTPTADKFGFSLKAVPTNRQSDPCG 104
           P  +    +L   P  S    PT  K G  L+ +P    +DP G
Sbjct: 79  PTQEQGLRALIEKP--STDPVPTNWKDGGYLERLP----NDPWG 116