Pairwise Alignments

Query, 244 a.a., iron-sulfur cluster-binding protein NapG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 55.8 bits (133), Expect = 8e-13
 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 45/162 (27%)

Query: 67  CVRCGLCVEACPYDTLTLARWFDGAATGTPFFTARHIPCEMCEDIPCIKACPSGALDP-- 124
           C+RC LC E CP D +          +       + + CE+     C K CP GA++   
Sbjct: 48  CIRCELCYEMCPVDAIK----EPSVKSPAEILPEKCVKCEI-----CAKTCPVGAINVLE 98

Query: 125 ------------QLEHISDAKMGIAVL---IDEKNCLNFKGLRCDVCYRVCPLIDNAITL 169
                       +L+ I      I ++   +DE++C     ++C +C R CP   +AIT+
Sbjct: 99  GRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESC-----IKCGICERFCP--TSAITV 151

Query: 170 ERQRNQHSDHHAMFLPTVNSDTCTGCGKCEHACVLDTAAIKV 211
           E++ +            +N + C GC  CE  C    +AIKV
Sbjct: 152 EKRNS----------IDINLNLCMGCTACEKVC--PKSAIKV 181



 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 29/145 (20%)

Query: 66  ACVRCGLCVEACPYDTLTLARWFDGAATGTPFFTARHIPCEMCEDIPCIKACPSGALDPQ 125
           +C++CG+C   CP   +T+ +                + C  CE     K CP  A+  +
Sbjct: 133 SCIKCGICERFCPTSAITVEK-----RNSIDINLNLCMGCTACE-----KVCPKSAIKVE 182

Query: 126 LEHISDAKMGIAVLIDEKNCLNFKGLRCDVCYRVCPLIDNAITLERQRNQHSDHHAMFLP 185
            E      MG     +E +  N   + C VC  +CP+   AI  E             L 
Sbjct: 183 NE------MGEITAENEISLNNDTCINCMVCSEICPV--GAIVYEDG-----------LM 223

Query: 186 TVNSDTCTGCGKCEHACVLDTAAIK 210
            ++   C  CGKCE  C +   AIK
Sbjct: 224 KLDDKMCIFCGKCEKNCPVTAIAIK 248



 Score = 26.6 bits (57), Expect = 5e-04
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 13/64 (20%)

Query: 149 KGLRCDVCYRVCPLIDNAITLERQRNQHSDHHAMFLPTVNSDTCTGCGKCEHACVLDTAA 208
           K +RC++CY +CP       ++  +       A  LP    + C  C  C   C     A
Sbjct: 47  KCIRCELCYEMCP-------VDAIKEPSVKSPAEILP----EKCVKCEICAKTC--PVGA 93

Query: 209 IKVL 212
           I VL
Sbjct: 94  INVL 97