Pairwise Alignments

Query, 319 a.a., iron-sulfur cluster-binding protein napH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 838 a.a., nitrogen assimilation regulatory protein from Synechococcus elongatus PCC 7942

 Score = 51.2 bits (121), Expect = 9e-11
 Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 28/186 (15%)

Query: 105 GRVFCSWVCPVNLVTDTASWLRRKLKLPRTSELPRNLR-----YYLLALVLLLPLLTGSL 159
           GR++C++ CP  +  +   W+  KL        PR        ++L  L  L+      L
Sbjct: 471 GRLWCAY-CPFMIYGELVQWVSLKLWPRSLLPWPRAAAERWGGWFLFGLFALI------L 523

Query: 160 IWE--W-VNPVPLVYRAVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLVGK 216
           +WE  W +  V  +   +L      L I A      L    R WC +LCP G + GL  K
Sbjct: 524 LWEELWHLEDVAWLSACLL------LLITAGAVTFSLLFERRFWCRYLCPIGGMNGLFAK 577

Query: 217 WSPIKIVASK--ASACDNCMDCFAVCP-----ERQVLKPALKGQSPVISSPDCTQCGRCI 269
            + I++ A +   SA  N   C+   P     +  +  P     + ++ + +C  C  C+
Sbjct: 578 LAVIELRAKRGVCSATCNTYQCYKGGPAKGEGQETMGCPVYSHPAQLVDNRNCVLCMTCL 637

Query: 270 DVCAQR 275
             C  R
Sbjct: 638 KACPHR 643