Pairwise Alignments

Query, 319 a.a., iron-sulfur cluster-binding protein napH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., quinol dehydrogenase membrane component (RefSeq) from Shewanella amazonensis SB2B

 Score =  416 bits (1069), Expect = e-121
 Identities = 203/317 (64%), Positives = 241/317 (76%), Gaps = 15/317 (4%)

Query: 3   SKAKARTQNEHAAAIAELGWFGAHKYLLLRRTVQLSLLGLFALGPLLGIWLFKGNLSASL 62
           S AK         AI ELGW+ AH++LLLRR  QL++L LFA+GPLLG+WL KGNLS+SL
Sbjct: 2   STAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSSL 61

Query: 63  LLDTIPFADPLVSLQLLLAGHTPELSLLIGAGLVTAFYALAGGRVFCSWVCPVNLVTDTA 122
           LLDTIP ADPLV+LQLL AGH PE SLLIGA ++  FYAL GGRVFCSWVCPVN+VTD A
Sbjct: 62  LLDTIPMADPLVTLQLLTAGHVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDLA 121

Query: 123 SWLRRKLKLPRTSELPRNLRYYLLALVLLLPLLTGSLIWEWVNPVPLVYRAVLFGSLSGL 182
           ++LRR+  LPRT ELPR LRY++LALVLLLP++TG   WEW+NPVP++YRAVLFG+ +GL
Sbjct: 122 AYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAWEWLNPVPVLYRAVLFGAGAGL 181

Query: 183 WILAAIFLLDLFIAERAWCGHLCPTGALFGLVGKWSPIKIVASKASACDNCMDCFAVCPE 242
            +L AIFL DL I ER WC HLCP+GALF L+GK SP+K+ A  A  C+NCMDCF VCPE
Sbjct: 182 GLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCPE 241

Query: 243 RQVLKPALKGQSPVISSPDCTQCGRCIDVCAQRVFRYRTRFTGTQTQLSTGGSTNSQSPS 302
           RQVLKPALKG +P+I+  DCTQCGRCIDVCA+ VF+Y+ RF            T   +P 
Sbjct: 242 RQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRF------------TFQDNPL 289

Query: 303 SSSPIRQHIAPKAENDQ 319
             SP    IA KAEN+Q
Sbjct: 290 QKSP---RIAKKAENEQ 303