Pairwise Alignments

Query, 319 a.a., iron-sulfur cluster-binding protein napH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 45/262 (17%)

Query: 28  YLLLRRTVQLSLLGLFALGPLLGIWLFKGNLSASLLLDTIPFADPLVSLQLLLAGHTPEL 87
           + L+R  ++ S LG F +             + S  L  + F   ++ L   L+  TP+L
Sbjct: 5   FQLIRNLIKTSFLGYFLV-------------NNSFCLCIVGFVQRIL-LTFNLSEITPQL 50

Query: 88  SLLIGAGLVTAFYALAGGRVFCSWVCPVNLVTDTASWLRRKLK----LPRTSELPRNLRY 143
              IG   V+  +    GR+FC ++CP  ++ +    L+ K+     LP+      N   
Sbjct: 51  ---IGLSAVSIVF----GRLFCGFICPFGIIFEWTYKLKMKINNSKILPKVDPKIHNKLI 103

Query: 144 YLLALVLLLPLLTGSLIWEWVNPVPLVYRAVLFGSLSGL------WILAAIFLLDLFIAE 197
           YL  ++L++ L    L +++   V  +      GS +GL      +IL  +F++  +   
Sbjct: 104 YLKYILLIIGLY---LTFKYTTYV--ICGVCPIGSFAGLNGTVISFILLGLFIILGYFIP 158

Query: 198 RAWCGHLCPTGALFGLVGKWSPIKIVASKASACDNCMDCFAVCPERQVLKPALKGQSPVI 257
             +C + CP GAL GL+      KI ++    C+ C  C   CP +  +   +       
Sbjct: 159 MFFCRYFCPIGALLGLLSVKPVFKIKSN--DKCNTCRLCELKCPMQINILDNM------- 209

Query: 258 SSPDCTQCGRCIDVCAQRVFRY 279
              +C +C +C+  C +   +Y
Sbjct: 210 DEKECIRCFQCVTACKKGGIKY 231