Pairwise Alignments

Query, 489 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (313), Expect = 4e-33
 Identities = 65/177 (36%), Positives = 103/177 (58%), Gaps = 1/177 (0%)

Query: 306 KNEQLEALRLRLEHTNAELEFLSTHDPLTKLYNRHYFNRQFVHEHRSEISSEGAICLVML 365
           + E L+ L   L   N +   ++  D LT   NRH        + R        + ++ +
Sbjct: 252 RQEHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFI 311

Query: 366 DIDFFKEINDTLGHAVGDNILMELSGVLQHCVRETDVVARWGGEEFVILCHQTSIDLVKT 425
           DID+FK++ND  GH++GD++L E + V+   +RE+D + RWGGEEFV+ C QT+++    
Sbjct: 312 DIDYFKQVNDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIE 371

Query: 426 LCQRIAAAIKDYRFSGNVQLTCSFGIAKLVNNEPMQSCFERADKALYQAKALGRNQI 482
           L +R+ A I D+ +     +TCS GIA++  +E +     RAD+ALY+AK LGRN+I
Sbjct: 372 LAERLRAKIADHSWIHGGAITCSIGIAQM-GDERITETVSRADEALYRAKRLGRNRI 427