Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 291 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  183 bits (465), Expect = 4e-51
 Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 4/291 (1%)

Query: 1   MPDLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQ 60
           M  LN M LF  V RA+ F +AA   G P ST+SR++++LE+ +G+RLL R TR + LT+
Sbjct: 1   MRHLNDMALFVEVARARSFRKAAEALGMPNSTLSRRVSELEKAIGLRLLHRTTRKIELTE 60

Query: 61  VGALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPN 120
            G L+Y+    I +E   A   + +  +  SG LR+++PV+ +   +  +   F R YP 
Sbjct: 61  AGQLYYERSKRIVDEARLAHEQLGAMLNQPSGVLRVSLPVNLATFYLTPIIGEFARHYPG 120

Query: 121 VELDVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPAT 180
           +  +   T   + LV E +D+AI+ G L+ S L+ RL+      L ASPGY++  G PAT
Sbjct: 121 ITFEFDLTPRRVDLVAEPFDVAIRIGKLEDSGLITRLIGRHSRHLYASPGYIEASGEPAT 180

Query: 181 PKELSDHSGILLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLS 240
           P EL++H    +G  RS PIW L +G  K  V+ + +  +NS  M++ LA++  GIA+L 
Sbjct: 181 PAELAEHE--CIGMLRS-PIWSLHQGINKVDVAVRGRFTLNSVGMIRALAVNHQGIALLP 237

Query: 241 NSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKR 291
                 ++A G+L  IL EW      ++ V +  R +      F++F   R
Sbjct: 238 EKIVAEDVAFGRLRRILPEWQGSAVSIFAV-TETRLIPAKTQRFIEFLSSR 287