Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (423), Expect = 3e-46
 Identities = 87/285 (30%), Positives = 154/285 (54%)

Query: 3   DLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVG 62
           DLN + +FA VV    F+ AA+  G  K+T+SRKIA+LE + GV+LL R TR L LT+ G
Sbjct: 2   DLNRIQMFAQVVDKGSFTSAAKAMGLTKATVSRKIAELETDTGVQLLYRTTRALKLTEAG 61

Query: 63  ALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVE 122
           +++Y     I  ++++A+  + ++ + + G+L+I  P+   Q     + + F+  +P + 
Sbjct: 62  SIYYNKIQRILMDLQSAEDQLSASQETIKGNLKIVCPIELGQLFFGRIFARFLEAHPEMT 121

Query: 123 LDVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATPK 182
           LD + T+  + ++ EG DI  +   ++ S L +  +      LVASP YL   GTPATP+
Sbjct: 122 LDAELTNRKVDMIEEGIDILFQVSDVRDSRLQSYRVLNTDKSLVASPDYLARHGTPATPQ 181

Query: 183 ELSDHSGILLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLSNS 242
           +L DH  I L ++     W L  G +   +  + ++ VN+  + ++ A++  GIA     
Sbjct: 182 DLIDHKAIRLKSTHIDGGWRLFDGQQWITIEPEAQLTVNNVTLAREAAIEGLGIATAPTL 241

Query: 243 ACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDF 287
             +  +  G L+P+L ++PM    +   +  R  L     AF+++
Sbjct: 242 VAQAAIDEGHLIPLLTDFPMAQTAITLSFPRRAYLPRKYRAFIEY 286