Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (420), Expect = 6e-46
 Identities = 92/279 (32%), Positives = 148/279 (53%)

Query: 9   LFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVGALFYQH 68
           LF +VV    FS+AAR  G  KS +S++I+ LE+ LGV+L+QR TR L LT  G  +Y++
Sbjct: 9   LFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQYYEY 68

Query: 69  CDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVELDVQFT 128
                  ++ A+  + S    V GSL++++P  F Q  IA L S F R YP + L+V   
Sbjct: 69  VHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEVSLD 128

Query: 129 DNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATPKELSDHS 188
           D  + L+ EG D+ ++ G L  S LVA  L     +L ASP YL  +  P +  +L  H+
Sbjct: 129 DRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLRGHN 188

Query: 189 GILLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLSNSACKTEL 248
            +     R    W   +    + +  +  ++VN+  ++++L LD  GIA++     + EL
Sbjct: 189 CLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLVEEEL 248

Query: 249 ANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDF 287
           A G LVP+L ++      +Y +   R+ +   +  F+DF
Sbjct: 249 AAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDF 287