Pairwise Alignments

Query, 243 a.a., conserved hypothetical protein TIGR00046 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 243 a.a., 16S ribosomal RNA methyltransferase RsmE (RefSeq) from Shewanella amazonensis SB2B

 Score =  388 bits (997), Expect = e-113
 Identities = 191/243 (78%), Positives = 218/243 (89%)

Query: 1   MRVPRIYQPQPLAVNQQLNLDEDGAAHIGKVLRMGNGEQISLFNGDGHDYLAEIIDAAKK 60
           MR+PRI+QP  L+ + +  LDEDG AH+G+VLRMG GEQI +FNGDG DYLA+I+ A KK
Sbjct: 1   MRIPRIFQPLDLSPSAEFALDEDGFAHVGRVLRMGEGEQIRVFNGDGKDYLADIVSAGKK 60

Query: 61  SVTVKVLSCEANPSESPLNLHLGQVISRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLS 120
           S+TVKV++ E N SESPL+LHLGQVISRGDRM+FT+QKSVELGVNTITPLFS+RCGVKLS
Sbjct: 61  SLTVKVVAVEDNQSESPLHLHLGQVISRGDRMDFTLQKSVELGVNTITPLFSERCGVKLS 120

Query: 121 GERLDKKIQQWQKIVISACEQSGRSQVPVVRPAMELQQWCSEPTSALKLNLHPRAAHGIN 180
           GERLDKKI QWQKIVISACEQ GR+ VPVVRP M+L +WC+E TSALKLNLHPRA HGIN
Sbjct: 121 GERLDKKIAQWQKIVISACEQCGRATVPVVRPVMDLAEWCAEQTSALKLNLHPRADHGIN 180

Query: 181 GLDLSHTRVRLLIGPEGGLSAEEIAMTETHQFTDVLLGPRVLRTETASLTAITALQLRFG 240
           GL L + RVRLLIGPEGGLSAEEIAMTETH+FT+VLLGPRVLRTETA+LTAITALQ++FG
Sbjct: 181 GLVLDNPRVRLLIGPEGGLSAEEIAMTETHKFTEVLLGPRVLRTETAALTAITALQMKFG 240

Query: 241 DLG 243
           DLG
Sbjct: 241 DLG 243