Pairwise Alignments

Query, 563 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 556 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  712 bits (1838), Expect = 0.0
 Identities = 351/556 (63%), Positives = 439/556 (78%)

Query: 1   MLAPELLELSSDKSQAELRLIPKDHGPINRDDVMRLLSLPEFCLLHPLDQAIDKVVAQTN 60
           MLAPELLELS D  +AELRLIP  HGP++ +D+  LL+LP F  L PL+  I K V   N
Sbjct: 1   MLAPELLELSEDGIKAELRLIPATHGPVSENDLRELLALPGFAELCPLEPVIQKAVISIN 60

Query: 61  TLCNQDKGKFELFAVLAERRDGSVKIEISPDKMLATMTLTAPCGGKAVDLPEILTELKKN 120
            LC QD GKFE F  +AERR+G V IE+SPD+M A M + A  GGK + L ++L  LK  
Sbjct: 61  KLCGQDDGKFEQFFAIAERRNGKVVIEVSPDQMQAEMEIVAAYGGKQISLQDVLVALKAE 120

Query: 121 NVCMGLSKLKIQTLLQKMTKLKPGNSCKNEIAQGKHAINGQNAVLERKVSLARERLLQPQ 180
            V MGLSK++I+ LL+++  L PG SCK  IA GK A+NG+NA+L+RKV LARERLLQPQ
Sbjct: 121 GVSMGLSKVRIEQLLKQIPTLAPGASCKQVIAIGKPAVNGENAILDRKVPLARERLLQPQ 180

Query: 181 EREDGTVDMRNLGSMIMVKPNDILMIKHPATEGSPGYNIKGEVIKQKPGKDLPLQAGTGA 240
           EREDGTVDMRNLGS+I VKPND+LM+K PAT+G  G+ +KG  +   PGKDLPL  G G 
Sbjct: 181 EREDGTVDMRNLGSVITVKPNDVLMVKIPATDGIQGFTVKGTPLPPIPGKDLPLVPGDGT 240

Query: 241 DFHPKDPNKLIATVAGQPVETRTGVNVDDVLQVKDVDISTGHVTFKGSILITGDVHEGMI 300
              PKDP+KLIATVAGQPVETRTG+ VDD+LQ+K+VD+  GHV FKGS+LITGDVHEGM 
Sbjct: 241 ALSPKDPHKLIATVAGQPVETRTGMQVDDMLQIKEVDVKYGHVNFKGSVLITGDVHEGMQ 300

Query: 301 VKSAGDITVMGFVDSATLEAEGDITVSKGVIGRQIRVNEFSTNLTAQGQISAQFVQYSQL 360
           V+++GDITVMGFVDSA LEAEGDI VSKGVIGRQ+  N+ ST L A+GQI+AQFVQYS+L
Sbjct: 301 VRASGDITVMGFVDSAQLEAEGDIIVSKGVIGRQLADNKHSTVLKAKGQIAAQFVQYSEL 360

Query: 361 TAKGNILITKQLLHSNTKTAGTLTVSDTSGRRGDLIGGIAHAEKGLIAVAIGATAGTKTE 420
            A+G+I +TKQLLHSNT T   L VSD +GRRGDL+GG AHA KG+ AV IGATAGTKTE
Sbjct: 361 VAEGDIQVTKQLLHSNTTTLSKLLVSDNNGRRGDLVGGQAHAAKGVRAVVIGATAGTKTE 420

Query: 421 VFCAMEQGELKQNLKHIEESVQAMVLATLDIEARLKKLPPKSEWQNDPVMIEQIKIMLDE 480
           +FCAM+  +LK  L+ ++ESV++MV+A LDI+AR++KLPPKSEWQ+DPVM+EQ+++M+++
Sbjct: 421 IFCAMDLSDLKNELRALDESVKSMVVACLDIDARIRKLPPKSEWQDDPVMLEQVRMMMEQ 480

Query: 481 KNRILNERIREELEFDGLKQEVESYFDKYHIDVIKHVFLNVEFHIGQANHRTTREHGTCS 540
           K R+  ER+ EE  F+ LKQEV++Y+  Y ++V+KH+F NVE HIGQA +RT REHGTC 
Sbjct: 481 KKRMSEERVLEEQRFEALKQEVDNYYANYRVEVLKHIFANVELHIGQAFNRTQREHGTCI 540

Query: 541 ISNINQEINFDYNAKP 556
           ++N  QE+ FDY+AKP
Sbjct: 541 VTNQGQEVYFDYSAKP 556