Pairwise Alignments

Query, 563 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., protein of unknown function DUF342 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 26/315 (8%)

Query: 177 LQPQEREDGTVDMRNLGSMIMVKPNDILMIKHPATEGSPGYNIKGEVIKQKPGKDLPLQA 236
           L+P+  + G +D  NLG +  V    +L    P  E   G  +    +   P  +LP   
Sbjct: 18  LKPKADDAGNIDRYNLGYVQNVVKGQVLAELVPLEEAGEG-PLDPRYVYDTPPVELP--C 74

Query: 237 GTGADFHPKDPNKLIATVAGQPVETRTGVNVDDVLQVK-DVDISTGHVTFKGSILITGDV 295
           G   +  P  PN+++A   G        + V  +L V+ DVD  TG++ F G + I  DV
Sbjct: 75  GPNCELDPGSPNRVVADANGYVFYHDGLITVKKMLNVRRDVDFHTGNIFFVGDMAIHADV 134

Query: 296 HEGMIVKSAGDITVMGFVDSATLEAEGDITVSKGVIGRQIRVNEFSTNLTAQGQISAQFV 355
             G  ++ A +I V G V+ A + A G I    G+ G +      S  L A   +   F 
Sbjct: 135 KPGFEIQ-ADNILVKGVVEGAVVRARGAIACESGIKGGK------SCLLDAGDTLRVPFA 187

Query: 356 QYSQLTAKGNILITKQLLHSNTKTAGTLTVSDTSGRRGDLIGGIAHAEKGLIAV--AIGA 413
           + ++L + GN+ I +  LH        L V D       + GG  H   G++ +   +G 
Sbjct: 188 ENAELRSHGNMYIERFALHCRIYAGANLVVKDR------VQGGTVHG-AGVVYIENQLGG 240

Query: 414 TAGTKTEVFCAMEQGELKQNLKHIEESVQAMVLATLDIEARLKKLPPKSEWQNDPVMIEQ 473
             GT T+V    +  + ++ +  +EE+++ +    +  EA     P   E   +PV   +
Sbjct: 241 AQGTPTKVNLGYDPFKFRK-ITRLEENIRDLRQRIIHYEAVAADTPAGKE---EPV--RR 294

Query: 474 IKIMLDEKNRILNER 488
           ++  L + +R+L +R
Sbjct: 295 LEAALKKMDRLLRQR 309