Pairwise Alignments

Query, 563 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 563 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  989 bits (2557), Expect = 0.0
 Identities = 493/563 (87%), Positives = 534/563 (94%)

Query: 1   MLAPELLELSSDKSQAELRLIPKDHGPINRDDVMRLLSLPEFCLLHPLDQAIDKVVAQTN 60
           MLAPELLELSSDK++AELRLIP +HGPI RDDVMRLLS+PEF  L PL+ AIDKV+AQTN
Sbjct: 1   MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTN 60

Query: 61  TLCNQDKGKFELFAVLAERRDGSVKIEISPDKMLATMTLTAPCGGKAVDLPEILTELKKN 120
           +LC+Q+ GK+ELFAVLAERRDGSVKIE+S DKM ATM LTAP GGKAVDLPEILT+LKK+
Sbjct: 61  SLCHQEDGKYELFAVLAERRDGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKD 120

Query: 121 NVCMGLSKLKIQTLLQKMTKLKPGNSCKNEIAQGKHAINGQNAVLERKVSLARERLLQPQ 180
           NVCMGLSKLKIQTLLQKMTKLKPG SC++EIAQGK AINGQNAVLERKVS+ARERLLQPQ
Sbjct: 121 NVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAINGQNAVLERKVSIARERLLQPQ 180

Query: 181 EREDGTVDMRNLGSMIMVKPNDILMIKHPATEGSPGYNIKGEVIKQKPGKDLPLQAGTGA 240
           EREDGTVDMRNLG+MIMVKPND+LMIKHPATEGSPGYNIKGEV+KQKPGKDL LQ GTG 
Sbjct: 181 EREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT 240

Query: 241 DFHPKDPNKLIATVAGQPVETRTGVNVDDVLQVKDVDISTGHVTFKGSILITGDVHEGMI 300
           DFHPKDPNKLIATVAGQPVETRTG+NVDDVLQ+KDVDISTGH+ FKGSILITGDVHEGM+
Sbjct: 241 DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMM 300

Query: 301 VKSAGDITVMGFVDSATLEAEGDITVSKGVIGRQIRVNEFSTNLTAQGQISAQFVQYSQL 360
           VKS+GDITVMGFVDSATLEA+GDITVSKGVIGRQ+RVNEFSTN+TAQGQISAQFVQYSQL
Sbjct: 301 VKSSGDITVMGFVDSATLEADGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQL 360

Query: 361 TAKGNILITKQLLHSNTKTAGTLTVSDTSGRRGDLIGGIAHAEKGLIAVAIGATAGTKTE 420
           TAKGNILITKQLLHSNTKTAGTLTVSD SGRRGDL+GG+ HAEKGL AV IGATAGTKTE
Sbjct: 361 TAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVVHAEKGLTAVVIGATAGTKTE 420

Query: 421 VFCAMEQGELKQNLKHIEESVQAMVLATLDIEARLKKLPPKSEWQNDPVMIEQIKIMLDE 480
           V+CAMEQGELKQNLK +EESV AMV+ATLDIEARLKKLPPKSEWQ+DP+MIEQIK+MLDE
Sbjct: 421 VYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE 480

Query: 481 KNRILNERIREELEFDGLKQEVESYFDKYHIDVIKHVFLNVEFHIGQANHRTTREHGTCS 540
           KNRIL ER REELEFD LKQEVE+Y+DKY IDVIKHVFLN EFHIGQANHRTTREHGTCS
Sbjct: 481 KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCS 540

Query: 541 ISNINQEINFDYNAKPKAQGATN 563
           I+N+NQEINFDYNAKPKAQ A++
Sbjct: 541 ITNLNQEINFDYNAKPKAQAASH 563