Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 687 a.a., TonB-dependent receptor from Pedobacter sp. GW460-11-11-14-LB5

 Score = 98.6 bits (244), Expect = 8e-25
 Identities = 112/419 (26%), Positives = 175/419 (41%), Gaps = 49/419 (11%)

Query: 7   KIALLIG-SLCSFSIIAPVMAADDTSTAKVDEHLVVIGRSDKTPLNIAANVNVIDAAAIE 65
           KI L I  SLC F  +A  +  D T    + + ++      +T  N   NV  I AA I+
Sbjct: 2   KIYLSIALSLCGFVTVAQEIKVDTTKANDLKDVVITGQYGPQTLRNSVYNVKTISAARIK 61

Query: 66  MSGATNLTDVLRGQSGIQIS-DNNIGTS-FAMRGFSASTAVNNTLILLDGRRLNNIDIAA 123
           +  ATN+  VL  + G + S D  +GT+  ++ G +      N  ILLDG  + +   A 
Sbjct: 62  LRAATNVQQVLNTELGFRFSNDLTLGTTDVSLMGMTG----RNIKILLDGVPMVDRSDAR 117

Query: 124 PSLNAIPLNLVERVEILSGSAGVLYGDQAVGGVINIVTKSP------ENTGGSVQLSGGS 177
            SLN I +N +ERVEI+ G   V+YG  A+ GVINI+TK+P       N     + +G  
Sbjct: 118 ESLNQIDINTIERVEIVEGPMSVVYGTDALAGVINIITKNPGKQLLSVNARVQEETAGNE 177

Query: 178 FNTYEGRGDVSGAIN-----KDWRYFLSGSYNQ--GDNYRQHNAN--ETGSILGRIQYKT 228
           +N   G G  +  ++     K W   L  S+N+  G N     A   E  SIL R + K 
Sbjct: 178 YNLLNGAGQHNQNLSVSWQKKGWSVLLGASHNEFGGWNLASKTATIAEVNSILSRWKPK- 236

Query: 229 ATDSFFVETSYYDDDRENPGSLTVDQFKFD--PRQSSNKSEYVHEMTTAARSGYQHQLNQ 286
             + F   T     +        +D  K D   R   N + Y   + T     Y  QL  
Sbjct: 237 --EQFLGNTKIGYRNNNFNIWYRLDGLKEDIFVRNGLNPNNYKGILQTYTTHRYAQQLQS 294

Query: 287 NWALAADL--------------------DYSDTLVSSVNWGAGSHNTRSLLMFSPKALAN 326
            +  +  L                    D+S+     ++ G G  +         +A A 
Sbjct: 295 EYKFSNKLQLSAIAGFTKLDRATRTVIHDFSNN-TEELSPGLGEQDVAKFNSTIFRATAI 353

Query: 327 YSTRQGELNLVTGLDISRGKADYDSMARSNVQDMQSAYLQATVPLSHTLSYVVGGRYAR 385
           Y   Q  ++   G++ +R  A    ++ S V +  +A+L A + LS  ++   G R+ +
Sbjct: 354 YILNQ-FVSFQPGIEYNRDAASGQRISGSPVINDYAAFLSAEIKLSAGINIRPGLRFIK 411