Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 654 a.a., outer membrane cobalamin receptor protein from Dechlorosoma suillum PS

 Score =  238 bits (608), Expect = 5e-67
 Identities = 194/660 (29%), Positives = 290/660 (43%), Gaps = 41/660 (6%)

Query: 17  SFSIIAPVMAADDTSTAKVDEHLVVIGRSDKTPLNIAANVNVIDAAAIEMSGATNLTDVL 76
           +F++ A    A++ S   V   +V   R  +     AAN++VI    IE + ATNLTD+L
Sbjct: 13  AFALPATAALAEEASLQSV---IVTATRFSEADCRTAANISVISREDIEKTPATNLTDLL 69

Query: 77  RGQSGIQI----SDNNIGTSFAMRGFSASTAVNNTLILLDGRRLNNIDIAAPSLNAIPLN 132
             ++GI          +  +  MRGF  STA +NTL+LLDG+R++  D+     ++IPL 
Sbjct: 70  ATRAGINAMPIYGPLGLDATVDMRGFG-STATSNTLVLLDGQRISPTDMGTIIWSSIPLT 128

Query: 133 LVERVEILSGSAGVLYGDQAVGGVINIVTKSPENTGGSVQLSGGSFNTYEGRGDVSGAIN 192
            +ER+E++ GS  VLYGD A GGVINI+T        S+  + GSF  Y G        N
Sbjct: 129 GIERIEVVRGSGTVLYGDGATGGVINIITDKSGKPRASITATAGSFG-YRGLDGSFAGGN 187

Query: 193 KDWRYFLSGSYNQGDNYRQHNANETGSILGRIQYKTATDSFFVETSYYDDDRENPGSLTV 252
           +     L       D YRQ++  +  +  GR+  K      F + + Y +    PG+L  
Sbjct: 188 EHLYGNLFVRSASLDGYRQNSQQDQQAASGRVGLKLERGEVFSDFAVYKESSGLPGNLLQ 247

Query: 253 DQFKFDPRQSSNKSEYVHEMTTAARSGYQHQLNQNWALAADLDYS----DTLVSSVNWGA 308
             ++ DPR S    +         R G  + L+    L  ++ +     +T + S NW  
Sbjct: 248 ATYENDPRNSRKPYDTQRRDGYRVRPGVAYALSDKVDLETEVSFEHQTLNTDLVSSNW-- 305

Query: 309 GSHNTRSLLMFSPKALANYSTRQGELNLVTGLDISRGKADYDSMARSN---VQDMQSAYL 365
            S   R  L F+P+   N+           G+D    K    +    N    Q   + YL
Sbjct: 306 KSERIRDTLSFTPRLRINHGLGTLGSETTVGVDYYDAKVTSTNQNGPNQRATQKSSAFYL 365

Query: 366 QATVPLSHTLSYVVGGRYARVTDELVDGNVYP----NGIDLDEDAT--AFEFGLNYRPSA 419
           Q    L+  LS  +G R  R+       + YP     G+D     T  A++ GL Y  S 
Sbjct: 366 QNLTNLTSALSLTLGARQQRMKQSAYQ-DAYPAWFQPGMDGSASRTRSAYDLGLTY-GSG 423

Query: 420 EHRFYLRGDENFRFAKVDE------QAYTPKDVFGLKPQTGRSYEAGWDWTVASQSLRVS 473
             +F+ +    FRFA +DE       A+ P     LKPQ GR+ E G      S S R +
Sbjct: 424 AWQFFGKTGTTFRFANLDELFGYDNLAFRPVFAGDLKPQHGRTNEIGARVAQGSWSARAA 483

Query: 474 LYRLDLEDEIVFDPSAEKPVGGSFQGANVNADASRRYGASADWDWQVTQALQLGLEYNYI 533
           L+R  L DEI +D SA         GANVN D +RR G   + DW+++ ++   + Y Y+
Sbjct: 484 LFRTTLSDEIGYDASA---------GANVNLDPTRRQGLETEADWKLSSSVSAKISYTYL 534

Query: 534 DAEFTDGLNDGKKLSWVAEHSGRGYVSMDVAEHIQLFAEAIYTGERFVEGDNANQGEKLA 593
           DA F  G   GK++     H G   ++ D     Q        G+R    D  N    LA
Sbjct: 535 DATFRSGTYAGKRVPLAPTHQGSILLTWDGGSIGQYGVLTRMVGKRAYGSDFNNSHGDLA 594

Query: 594 SYVLGNLALNYSRDAWLASLRIDNLFDKDYVSSGYYGGNWGDGYYSGRGRDIRLTVGYRF 653
            Y   +L  +++   W    +I N  D  + +   Y    G  YY   GR + ++  Y F
Sbjct: 595 GYATLDLQASWNFKPWTLKAQIANALDHKHAAFAGYSSTAGHYYYPTDGRALFVSGRYDF 654