Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 612 a.a., outer membrane receptor for transport of vitamin B from Marinobacter adhaerens HP15

 Score =  112 bits (279), Expect = 6e-29
 Identities = 168/676 (24%), Positives = 258/676 (38%), Gaps = 106/676 (15%)

Query: 10  LLIG-SLCSFSIIAPVMAADDTSTAKVDEHLVVIGRSDKTPLNIAANVNVIDAAAIEMSG 68
           LL G SL +  + A   +A +T    +D  +V      KT     ++V VID   I+   
Sbjct: 9   LLAGLSLAALPLAASAQSAPETDA--LDPIVVTATLGPKTVGESLSSVTVIDKEDIDRQQ 66

Query: 69  ATNLTDVLRGQSGIQI-SDNNIG--TSFAMRGFSASTAVNNTLILLDGRRLNNIDIAAPS 125
                D+LR Q GI + SD + G  TS  +RG  +S     T++LLDG RL +     P 
Sbjct: 67  PAEFRDLLRAQPGINVVSDGSYGKTTSVFLRGAGSS----GTVLLLDGIRLRSASAGIPP 122

Query: 126 LNAIPLNLVERVEILSGSAGVLYGDQAVGGVINIVTKSPE-NTGGSVQLSGGSFNTYEGR 184
              +P  L+ERVE++ G+   LYG  AVGGVI   T  PE    G  +L GGS  T E  
Sbjct: 123 WQFLPPELMERVELVRGAKSSLYGADAVGGVIQAFTLEPEAGRQGWGELKGGSHETREVN 182

Query: 185 GDVSGAINKDWRYFLSGSYNQGDNYRQHNANETGSILGRIQYKTATDSFFVETSYYDDDR 244
             ++G   +   +  SG Y+  D     +  E                        D   
Sbjct: 183 AGLAGREGRS-SFLASGVYSDTDGTNLRDGGE------------------------DKGF 217

Query: 245 ENPGSLTVDQFKFDPRQSSNKSEYVHEMTTAARSGYQHQLNQNW-----ALAAD-----L 294
            N G L      FD    +  + +  E  T    G    L +       A+A+D     +
Sbjct: 218 RNTGGLAKLSHSFDLGGGAGLTVFQSEGNTEFEGGDTDFLIRAMGLHLEAVASDYWRTRI 277

Query: 295 DYSDTLVSSVNWGAGSHNTRSLLMFSPKALANYSTRQGELNLVTGLDISRGKADYDSMAR 354
            +S+       +GA   N  +    S  A    +   G   LV G ++   + D  S   
Sbjct: 278 QFSEARDEQDTFGA---NPSTFDTLSRSARWENTLTAGVHELVLGTEVMIDEVDGTSNFT 334

Query: 355 SNVQDMQSAYLQATVPLSHTLSYVVGGRYARVTDELVDGNVYPNGIDLDEDATAFEFGLN 414
            + +   + + Q  +                 TD ++   +  N     E+     FG  
Sbjct: 335 EDSRTNSAVFGQGRLNFD-------------ATDLMLSLRLDDNEAYGKEETGGVAFG-- 379

Query: 415 YRPSAEHRFYLRGDENFRFAKVDEQAYTPKDVFG---LKPQTGRSYEAGWDWTVASQSLR 471
           ++    HRF L    +FR    ++   T     G   L  + G+  EAG+          
Sbjct: 380 HQLDRAHRFRLSYATSFRAPTFNDLYLTVPFYTGNPDLDAEEGQMVEAGFSGRYDQWYWD 439

Query: 472 VSLYRLDLEDEIVF--DPSAEKPVGGSFQGANVNADASRRYGA-------SADWDWQVTQ 522
           V+LY+ D++D I +  DP+       +F+G   N + +R  G        +ADW+     
Sbjct: 440 VALYQNDVKDLITYVSDPA-------TFEGTMENVETARIRGVEVSSGIETADWN----- 487

Query: 523 ALQLGLEYNYIDAEFTDGLNDGKKLSWVAEHSGRGYVSMDVAEHIQLFAEAIYTGERFVE 582
              L     Y D E  D    G +L   AE +    V +DV    +LF++         E
Sbjct: 488 ---LAAAVTYADTENRD---TGARLPRRAEKN----VRLDVD---RLFSQWSVGASFIAE 534

Query: 583 GDNANQGEK---LASYVLGNLALNYS-RDAWLASLRIDNLFDKDYVSS-GYYGGNWGDGY 637
            D  N       L  Y   +L   ++ +  W AS ++DN+ D+ Y +S GY    +    
Sbjct: 535 SDRYNDAANTSLLPGYGTVDLRAAWNFQPGWSASFKVDNVLDRRYATSIGYDSATFAPFD 594

Query: 638 YSGRGRDIRLTVGYRF 653
           Y   GR    +V Y F
Sbjct: 595 YLAAGRTFMASVRYDF 610