Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 649 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 82.0 bits (201), Expect = 8e-20
 Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 25/165 (15%)

Query: 11  LIGSLCSFSIIAPVMAADDTSTAKVDEHLVVIGRSDKTPLNIA-ANVNVIDAAAIEMSGA 69
           L+   CS   +    A DDT      EH+VV   +    L+ A A+++VIDA  I++   
Sbjct: 21  LLALACSLQPLLSAQA-DDTEL----EHIVVTASAKDQQLSSAPASISVIDAEEIKLLPV 75

Query: 70  TNLTDVLRGQSGIQISDNNIG-TSFAMRGFSASTAVNNTLILLDGRRLN---------NI 119
            +L DVLRG  G+ +   N G  S  +RG   +      L+L++G+R++         N 
Sbjct: 76  KDLGDVLRGSVGVNVVSGNAGRNSLYVRGMDETYV----LMLVNGKRVSSSNGLWRGGNF 131

Query: 120 DIAAPSLNAIPLNLVERVEILSGSAGVLYGDQAVGGVINIVTKSP 164
           DI A     IP++ + RVEI+ G    LYG  AVGGVIN++TK+P
Sbjct: 132 DITA-----IPIDAISRVEIVRGPMSALYGSDAVGGVINVITKAP 171