Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., Ribokinase (EC 2.7.1.15) from Xanthomonas campestris pv. campestris strain 8004

 Score =  176 bits (447), Expect = 5e-49
 Identities = 129/316 (40%), Positives = 167/316 (52%), Gaps = 26/316 (8%)

Query: 1   MSHILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDF 60
           MS ++V+GS N DHV   + LP PG T+  R Y    GGKG NQAVA AR     ++  F
Sbjct: 1   MSSVVVVGSFNVDHVWRCDALPAPGATIAGR-YSTGPGGKGFNQAVAAARA---GAKTHF 56

Query: 61  ICHLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHL 120
           +C LG D+ G   R    +DG     I    N  TGT  I+V  +G N I I AGAN+ L
Sbjct: 57  LCALGDDAGGALARSLAAQDGFAL--IAEPSNEPTGTGGIYVDAHGRNTIVIGAGANSVL 114

Query: 121 TPLELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPA-ATQELDYLK 179
           +   ++   AL  +A+ LL QLE+P ETV +AL +A+  G+ TVLN APA A   +  LK
Sbjct: 115 SAGFVDNQRALVTSARVLLAQLESPAETVESALALARECGVLTVLNAAPANAPTSISLLK 174

Query: 180 WVDIITPNETEAEAL----TGIEVKHEEDAKLAAQWLHQQGIT-----TVVITLGSKGAF 230
             D++TPNETE  AL     G  +  ++ A L    LH          TVV+TLG+ GAF
Sbjct: 175 LSDVLTPNETEFAALLGRHVGERINADDVAALDGNTLHSLCRKLLPGGTVVVTLGAVGAF 234

Query: 231 ISSP-----GFTGL---IPALTVQAIDTVAAGDTFNGALVVGL--SEGMSIAAAVSFANA 280
           IS       G T     + A + Q +DT  AGD FNGALV  L  S   S    V FA  
Sbjct: 235 ISHAEEQLRGDTQAHYRVGAESAQTVDTTGAGDAFNGALVASLAHSPNASFITHVRFATR 294

Query: 281 ASAITVTREGAQRAIP 296
            +A +   EGA  ++P
Sbjct: 295 YAARSTEVEGAATSMP 310