Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., Carbohydrate kinase, PfkB from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (424), Expect = 2e-46
 Identities = 110/304 (36%), Positives = 162/304 (53%), Gaps = 4/304 (1%)

Query: 1   MSHILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDF 60
           MS I VIGS   D +   E +P  G+TL++  + +  GGKGANQA A A L    + V  
Sbjct: 1   MSKIAVIGSNMVDLITYIERMPAQGETLEAPRFAMGCGGKGANQAAAAALL---GADVLM 57

Query: 61  ICHLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHL 120
           +  +G D+  +    ++ + GI    +  V  VS+G A IFV +N  N+I I  GANAHL
Sbjct: 58  LSKVGDDAFADTTLANFQRLGIDTRFVERVPGVSSGVAPIFVQENSHNSILIVKGANAHL 117

Query: 121 TPLELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPA-ATQELDYLK 179
           +P ++++  A   +   +++QLE    TV +A+  A R  I  +LNPAPA A    ++L 
Sbjct: 118 SPADIDRAEAQLRDCALIVLQLEVELATVYHAIAFAHRHAIPVLLNPAPALAGLSREHLA 177

Query: 180 WVDIITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGL 239
            +D + PNE+E   ++G  V   E+A  AA+ L   G+  V++TLG +GA          
Sbjct: 178 QLDFLIPNESELALISGQPVTCAEEAAQAARQLVALGVRHVIVTLGEQGALYVGAEGEWQ 237

Query: 240 IPALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRS 299
           +P + VQA DT  AGD F G      S+  +I  A+  A A SA +VT  G Q + P  S
Sbjct: 238 VPGVKVQARDTTGAGDAFIGCFARHWSQDGNIRQAMHQAVAYSACSVTGLGTQSSYPDAS 297

Query: 300 EVSR 303
             +R
Sbjct: 298 TFAR 301