Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., Carbohydrate kinase, PfkB from Pseudomonas syringae pv. syringae B728a

 Score =  224 bits (572), Expect = 1e-63
 Identities = 132/299 (44%), Positives = 177/299 (59%), Gaps = 4/299 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           I+++GS N D V+  + LP PG+TL   ++    GGKGANQAVA ARL    + V  I  
Sbjct: 5   IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARL---GASVAMIGC 61

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G D+ G ++R + L + I  + +T+V+ VSTG A I V  N +NAI I AG N  LTP 
Sbjct: 62  VGADAYGEQLRAALLAEQIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLTPA 121

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQ-ELDYLKWVD 182
            LE+  AL A++Q ++ QLE PTETV + L  A+ LG T +LNPAPA+      +   +D
Sbjct: 122 LLERFDALLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPASWYALID 181

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
            + PNE+EA+ LTG+ V     A+ AA  +   G   V+ITLG  G   ++      IPA
Sbjct: 182 YLIPNESEAQTLTGVNVDSPAAAENAASVMLAAGARNVIITLGEHGTLFANASGMDHIPA 241

Query: 243 LTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
             VQA+DT AAGDTF G     LS G     A+ F  AA+AI+VTR GAQ +IP   EV
Sbjct: 242 RRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTFEEV 300